204 related articles for article (PubMed ID: 22962467)
1. LocTree2 predicts localization for all domains of life.
Goldberg T; Hamp T; Rost B
Bioinformatics; 2012 Sep; 28(18):i458-i465. PubMed ID: 22962467
[TBL] [Abstract][Full Text] [Related]
2. LocTree3 prediction of localization.
Goldberg T; Hecht M; Hamp T; Karl T; Yachdav G; Ahmed N; Altermann U; Angerer P; Ansorge S; Balasz K; Bernhofer M; Betz A; Cizmadija L; Do KT; Gerke J; Greil R; Joerdens V; Hastreiter M; Hembach K; Herzog M; Kalemanov M; Kluge M; Meier A; Nasir H; Neumaier U; Prade V; Reeb J; Sorokoumov A; Troshani I; Vorberg S; Waldraff S; Zierer J; Nielsen H; Rost B
Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W350-5. PubMed ID: 24848019
[TBL] [Abstract][Full Text] [Related]
3. PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes.
Yu NY; Wagner JR; Laird MR; Melli G; Rey S; Lo R; Dao P; Sahinalp SC; Ester M; Foster LJ; Brinkman FS
Bioinformatics; 2010 Jul; 26(13):1608-15. PubMed ID: 20472543
[TBL] [Abstract][Full Text] [Related]
4. PSORTdb--an expanded, auto-updated, user-friendly protein subcellular localization database for Bacteria and Archaea.
Yu NY; Laird MR; Spencer C; Brinkman FS
Nucleic Acids Res; 2011 Jan; 39(Database issue):D241-4. PubMed ID: 21071402
[TBL] [Abstract][Full Text] [Related]
5. PSORTdb: expanding the bacteria and archaea protein subcellular localization database to better reflect diversity in cell envelope structures.
Peabody MA; Laird MR; Vlasschaert C; Lo R; Brinkman FS
Nucleic Acids Res; 2016 Jan; 44(D1):D663-8. PubMed ID: 26602691
[TBL] [Abstract][Full Text] [Related]
6. PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria.
Gardy JL; Spencer C; Wang K; Ester M; Tusnády GE; Simon I; Hua S; deFays K; Lambert C; Nakai K; Brinkman FS
Nucleic Acids Res; 2003 Jul; 31(13):3613-7. PubMed ID: 12824378
[TBL] [Abstract][Full Text] [Related]
7. PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis.
Gardy JL; Laird MR; Chen F; Rey S; Walsh CJ; Ester M; Brinkman FS
Bioinformatics; 2005 Mar; 21(5):617-23. PubMed ID: 15501914
[TBL] [Abstract][Full Text] [Related]
8. MemLoci: predicting subcellular localization of membrane proteins in eukaryotes.
Pierleoni A; Martelli PL; Casadio R
Bioinformatics; 2011 May; 27(9):1224-30. PubMed ID: 21367869
[TBL] [Abstract][Full Text] [Related]
9. Detailed prediction of protein sub-nuclear localization.
Littmann M; Goldberg T; Seitz S; Bodén M; Rost B
BMC Bioinformatics; 2019 Apr; 20(1):205. PubMed ID: 31014229
[TBL] [Abstract][Full Text] [Related]
10. TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins.
Savojardo C; Martelli PL; Fariselli P; Casadio R
Bioinformatics; 2015 Oct; 31(20):3269-75. PubMed ID: 26079349
[TBL] [Abstract][Full Text] [Related]
11. LOCnet and LOCtarget: sub-cellular localization for structural genomics targets.
Nair R; Rost B
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W517-21. PubMed ID: 15215440
[TBL] [Abstract][Full Text] [Related]
12. LedPred: an R/bioconductor package to predict regulatory sequences using support vector machines.
Seyres D; Darbo E; Perrin L; Herrmann C; González A
Bioinformatics; 2016 Apr; 32(7):1091-3. PubMed ID: 26628586
[TBL] [Abstract][Full Text] [Related]
13. Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions.
Yu CS; Lin CJ; Hwang JK
Protein Sci; 2004 May; 13(5):1402-6. PubMed ID: 15096640
[TBL] [Abstract][Full Text] [Related]
14. Computational prediction of subcellular localization.
Nakai K; Horton P
Methods Mol Biol; 2007; 390():429-66. PubMed ID: 17951705
[TBL] [Abstract][Full Text] [Related]
15. A systematic survey of mini-proteins in bacteria and archaea.
Wang F; Xiao J; Pan L; Yang M; Zhang G; Jin S; Yu J
PLoS One; 2008; 3(12):e4027. PubMed ID: 19107199
[TBL] [Abstract][Full Text] [Related]
16. ProNA2020 predicts protein-DNA, protein-RNA, and protein-protein binding proteins and residues from sequence.
Qiu J; Bernhofer M; Heinzinger M; Kemper S; Norambuena T; Melo F; Rost B
J Mol Biol; 2020 Mar; 432(7):2428-2443. PubMed ID: 32142788
[TBL] [Abstract][Full Text] [Related]
17. Support vector machine approach for protein subcellular localization prediction.
Hua S; Sun Z
Bioinformatics; 2001 Aug; 17(8):721-8. PubMed ID: 11524373
[TBL] [Abstract][Full Text] [Related]
18. Pooled assembly of marine metagenomic datasets: enriching annotation through chimerism.
Magasin JD; Gerloff DL
Bioinformatics; 2015 Feb; 31(3):311-7. PubMed ID: 25306399
[TBL] [Abstract][Full Text] [Related]
19. Bioinformatics analysis of disordered proteins in prokaryotes.
Pavlović-Lažetić GM; Mitić NS; Kovačević JJ; Obradović Z; Malkov SN; Beljanski MV
BMC Bioinformatics; 2011 Mar; 12():66. PubMed ID: 21366926
[TBL] [Abstract][Full Text] [Related]
20. Computational probing protein-protein interactions targeting small molecules.
Wang YC; Chen SL; Deng NY; Wang Y
Bioinformatics; 2016 Jan; 32(2):226-34. PubMed ID: 26415726
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]