82 related articles for article (PubMed ID: 22987126)
1. Estimating functional groups in human gut microbiome with probabilistic topic models.
Chen X; He T; Hu X; Zhou Y; An Y; Wu X
IEEE Trans Nanobioscience; 2012 Sep; 11(3):203-15. PubMed ID: 22987126
[TBL] [Abstract][Full Text] [Related]
2. Exploiting the functional and taxonomic structure of genomic data by probabilistic topic modeling.
Chen X; Hu X; Lim TY; Shen X; Park EK; Rosen GL
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(4):980-91. PubMed ID: 21844637
[TBL] [Abstract][Full Text] [Related]
3. A metagenomic insight into our gut's microbiome.
Lepage P; Leclerc MC; Joossens M; Mondot S; Blottière HM; Raes J; Ehrlich D; Doré J
Gut; 2013 Jan; 62(1):146-58. PubMed ID: 22525886
[TBL] [Abstract][Full Text] [Related]
4. Beyond the bounds of orthology: functional inference from metagenomic context.
Vey G; Moreno-Hagelsieb G
Mol Biosyst; 2010 Jul; 6(7):1247-54. PubMed ID: 20419183
[TBL] [Abstract][Full Text] [Related]
5. [Metagenomics of the intestinal microbiota: potential applications].
Dusko Ehrlich S;
Gastroenterol Clin Biol; 2010 Sep; 34 Suppl 1():S23-8. PubMed ID: 20889001
[TBL] [Abstract][Full Text] [Related]
6. Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes.
Tasse L; Bercovici J; Pizzut-Serin S; Robe P; Tap J; Klopp C; Cantarel BL; Coutinho PM; Henrissat B; Leclerc M; Doré J; Monsan P; Remaud-Simeon M; Potocki-Veronese G
Genome Res; 2010 Nov; 20(11):1605-12. PubMed ID: 20841432
[TBL] [Abstract][Full Text] [Related]
7. A catalog of the mouse gut metagenome.
Xiao L; Feng Q; Liang S; Sonne SB; Xia Z; Qiu X; Li X; Long H; Zhang J; Zhang D; Liu C; Fang Z; Chou J; Glanville J; Hao Q; Kotowska D; Colding C; Licht TR; Wu D; Yu J; Sung JJ; Liang Q; Li J; Jia H; Lan Z; Tremaroli V; Dworzynski P; Nielsen HB; Bäckhed F; Doré J; Le Chatelier E; Ehrlich SD; Lin JC; Arumugam M; Wang J; Madsen L; Kristiansen K
Nat Biotechnol; 2015 Oct; 33(10):1103-8. PubMed ID: 26414350
[TBL] [Abstract][Full Text] [Related]
8. Information-theoretic approaches to SVM feature selection for metagenome read classification.
Garbarine E; DePasquale J; Gadia V; Polikar R; Rosen G
Comput Biol Chem; 2011 Jun; 35(3):199-209. PubMed ID: 21704267
[TBL] [Abstract][Full Text] [Related]
9. Metagenomics: key to human gut microbiota.
Maccaferri S; Biagi E; Brigidi P
Dig Dis; 2011; 29(6):525-30. PubMed ID: 22179207
[TBL] [Abstract][Full Text] [Related]
10. Identifying biologically relevant differences between metagenomic communities.
Parks DH; Beiko RG
Bioinformatics; 2010 Mar; 26(6):715-21. PubMed ID: 20130030
[TBL] [Abstract][Full Text] [Related]
11. Use of whole genome shotgun metagenomics: a practical guide for the microbiome-minded physician scientist.
Ma J; Prince A; Aagaard KM
Semin Reprod Med; 2014 Jan; 32(1):5-13. PubMed ID: 24390915
[TBL] [Abstract][Full Text] [Related]
12. Computational challenges of sequence classification in microbiomic data.
Ribeca P; Valiente G
Brief Bioinform; 2011 Nov; 12(6):614-25. PubMed ID: 21504986
[TBL] [Abstract][Full Text] [Related]
13. Pathway-based functional analysis of metagenomes.
Sharon I; Bercovici S; Pinter RY; Shlomi T
J Comput Biol; 2011 Mar; 18(3):495-505. PubMed ID: 21385050
[TBL] [Abstract][Full Text] [Related]
14. From bacterial to microbial ecosystems (metagenomics).
Williamson SJ; Yooseph S
Methods Mol Biol; 2012; 804():35-55. PubMed ID: 22144147
[TBL] [Abstract][Full Text] [Related]
15. The impact of normalization and phylogenetic information on estimating the distance for metagenomes.
Su CH; Wang TY; Hsu MT; Weng FC; Kao CY; Wang D; Tsai HK
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(2):619-28. PubMed ID: 21844636
[TBL] [Abstract][Full Text] [Related]
16. Metagenomics and antibiotics.
Garmendia L; Hernandez A; Sanchez MB; Martinez JL
Clin Microbiol Infect; 2012 Jul; 18 Suppl 4():27-31. PubMed ID: 22647044
[TBL] [Abstract][Full Text] [Related]
17. Comparison of dimensional reduction methods for detecting and visualizing novel patterns in human and marine microbiome.
Jiang X; Hu X; Xu W; He T; Park EK
IEEE Trans Nanobioscience; 2013 Sep; 12(3):199-205. PubMed ID: 23694698
[TBL] [Abstract][Full Text] [Related]
18. [Genetic analysis of intestinal microbiome by metagenomics].
Hattori M
Nihon Rinsho; 2010 Aug; 68 Suppl 8():506-10. PubMed ID: 20979302
[No Abstract] [Full Text] [Related]
19. Metagenomic analysis of intestinal microbiomes in chickens.
Kim T; Mundt E
Methods Mol Biol; 2011; 733():185-94. PubMed ID: 21431771
[TBL] [Abstract][Full Text] [Related]
20. From basic to applied research: lessons from the human microbiome projects.
Robles-Alonso V; Guarner F
J Clin Gastroenterol; 2014; 48 Suppl 1():S3-4. PubMed ID: 25291122
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
