533 related articles for article (PubMed ID: 22990765)
1. Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach.
Mukhopadhyay A; Ray S; De M
Mol Biosyst; 2012 Nov; 8(11):3036-48. PubMed ID: 22990765
[TBL] [Abstract][Full Text] [Related]
2. Protein complex prediction via cost-based clustering.
King AD; Przulj N; Jurisica I
Bioinformatics; 2004 Nov; 20(17):3013-20. PubMed ID: 15180928
[TBL] [Abstract][Full Text] [Related]
3. Complex discovery from weighted PPI networks.
Liu G; Wong L; Chua HN
Bioinformatics; 2009 Aug; 25(15):1891-7. PubMed ID: 19435747
[TBL] [Abstract][Full Text] [Related]
4. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
Ou-Yang L; Yan H; Zhang XF
BMC Bioinformatics; 2017 Dec; 18(Suppl 13):463. PubMed ID: 29219066
[TBL] [Abstract][Full Text] [Related]
5. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
Theofilatos K; Pavlopoulou N; Papasavvas C; Likothanassis S; Dimitrakopoulos C; Georgopoulos E; Moschopoulos C; Mavroudi S
Artif Intell Med; 2015 Mar; 63(3):181-9. PubMed ID: 25765008
[TBL] [Abstract][Full Text] [Related]
6. Discovering functional interdependence relationship in PPI networks for protein complex identification.
Lam WW; Chan KC
IEEE Trans Biomed Eng; 2012 Apr; 59(4):899-908. PubMed ID: 21095855
[TBL] [Abstract][Full Text] [Related]
7. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
Yu L; Gao L; Li K; Zhao Y; Chiu DK
Comput Biol Chem; 2011 Oct; 35(5):298-307. PubMed ID: 22000801
[TBL] [Abstract][Full Text] [Related]
8. Identifying protein complexes using hybrid properties.
Chen L; Shi X; Kong X; Zeng Z; Cai YD
J Proteome Res; 2009 Nov; 8(11):5212-8. PubMed ID: 19764809
[TBL] [Abstract][Full Text] [Related]
9. Identification of functional modules in a PPI network by clique percolation clustering.
Zhang S; Ning X; Zhang XS
Comput Biol Chem; 2006 Dec; 30(6):445-51. PubMed ID: 17098476
[TBL] [Abstract][Full Text] [Related]
10. Identifying protein complexes in protein-protein interaction networks by using clique seeds and graph entropy.
Chen B; Shi J; Zhang S; Wu FX
Proteomics; 2013 Jan; 13(2):269-77. PubMed ID: 23112006
[TBL] [Abstract][Full Text] [Related]
11. Detection of protein complexes using a protein ranking algorithm.
Zaki N; Berengueres J; Efimov D
Proteins; 2012 Oct; 80(10):2459-68. PubMed ID: 22685080
[TBL] [Abstract][Full Text] [Related]
12. Functional centrality: detecting lethality of proteins in protein interaction networks.
Tew KL; Li XL; Tan SH
Genome Inform; 2007; 19():166-77. PubMed ID: 18546514
[TBL] [Abstract][Full Text] [Related]
13. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
Xu B; Guan J
IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(4):616-27. PubMed ID: 26356332
[TBL] [Abstract][Full Text] [Related]
14. Global alignment of protein-protein interaction networks.
Mongiovì M; Sharan R
Methods Mol Biol; 2013; 939():21-34. PubMed ID: 23192538
[TBL] [Abstract][Full Text] [Related]
15. Structure discovery in PPI networks using pattern-based network decomposition.
Bachman P; Liu Y
Bioinformatics; 2009 Jul; 25(14):1814-21. PubMed ID: 19447784
[TBL] [Abstract][Full Text] [Related]
16. SPIDer: Saccharomyces protein-protein interaction database.
Wu X; Zhu L; Guo J; Fu C; Zhou H; Dong D; Li Z; Zhang DY; Lin K
BMC Bioinformatics; 2006 Dec; 7 Suppl 5(Suppl 5):S16. PubMed ID: 17254300
[TBL] [Abstract][Full Text] [Related]
17. From pull-down data to protein interaction networks and complexes with biological relevance.
Zhang B; Park BH; Karpinets T; Samatova NF
Bioinformatics; 2008 Apr; 24(7):979-86. PubMed ID: 18304937
[TBL] [Abstract][Full Text] [Related]
18. Detecting functional modules in the yeast protein-protein interaction network.
Chen J; Yuan B
Bioinformatics; 2006 Sep; 22(18):2283-90. PubMed ID: 16837529
[TBL] [Abstract][Full Text] [Related]
19. Identification of human protein complexes from local sub-graphs of protein-protein interaction network based on random forest with topological structure features.
Li ZC; Lai YH; Chen LL; Zhou X; Dai Z; Zou XY
Anal Chim Acta; 2012 Mar; 718():32-41. PubMed ID: 22305895
[TBL] [Abstract][Full Text] [Related]
20. A methodology for detecting the orthology signal in a PPI network at a functional complex level.
Jancura P; Mavridou E; Carrillo-de Santa Pau E; Marchiori E
BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S18. PubMed ID: 22759423
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
