187 related articles for article (PubMed ID: 23006764)
1. PathNet: a tool for pathway analysis using topological information.
Dutta B; Wallqvist A; Reifman J
Source Code Biol Med; 2012 Sep; 7(1):10. PubMed ID: 23006764
[TBL] [Abstract][Full Text] [Related]
2. Stepwise PathNet: a layer-by-layer knowledge-selection-based transfer learning algorithm.
Imai S; Kawai S; Nobuhara H
Sci Rep; 2020 May; 10(1):8132. PubMed ID: 32424180
[TBL] [Abstract][Full Text] [Related]
3. Development and use of a Cytoscape app for GRNCOP2.
Díaz-Montaña JJ; Díaz-Díaz N; Barranco CD; Ponzoni I
Comput Methods Programs Biomed; 2019 Aug; 177():211-218. PubMed ID: 31319950
[TBL] [Abstract][Full Text] [Related]
4. SEMgsa: topology-based pathway enrichment analysis with structural equation models.
Grassi M; Tarantino B
BMC Bioinformatics; 2022 Aug; 23(1):344. PubMed ID: 35978279
[TBL] [Abstract][Full Text] [Related]
5. Comparative study on gene set and pathway topology-based enrichment methods.
Bayerlová M; Jung K; Kramer F; Klemm F; Bleckmann A; Beißbarth T
BMC Bioinformatics; 2015 Oct; 16():334. PubMed ID: 26489510
[TBL] [Abstract][Full Text] [Related]
6. SPATIAL: A System-level PAThway Impact AnaLysis approach.
Bokanizad B; Tagett R; Ansari S; Helmi BH; Draghici S
Nucleic Acids Res; 2016 Jun; 44(11):5034-44. PubMed ID: 27193997
[TBL] [Abstract][Full Text] [Related]
7. IPAD: the Integrated Pathway Analysis Database for Systematic Enrichment Analysis.
Zhang F; Drabier R
BMC Bioinformatics; 2012; 13 Suppl 15(Suppl 15):S7. PubMed ID: 23046449
[TBL] [Abstract][Full Text] [Related]
8. Identifying differential correlation in gene/pathway combinations.
Braun R; Cope L; Parmigiani G
BMC Bioinformatics; 2008 Nov; 9():488. PubMed ID: 19017408
[TBL] [Abstract][Full Text] [Related]
9. Pathway and Network Analysis of Differentially Expressed Genes in Transcriptomes.
Huang Q; Sun MA; Yan P
Methods Mol Biol; 2018; 1751():35-55. PubMed ID: 29508288
[TBL] [Abstract][Full Text] [Related]
10. Exploring matrix factorization techniques for significant genes identification of Alzheimer's disease microarray gene expression data.
Kong W; Mou X; Hu X
BMC Bioinformatics; 2011; 12 Suppl 5(Suppl 5):S7. PubMed ID: 21989140
[TBL] [Abstract][Full Text] [Related]
11. PathNet: Path-Selective Point Cloud Denoising.
Wei Z; Chen H; Nan L; Wang J; Qin J; Wei M
IEEE Trans Pattern Anal Mach Intell; 2024 Jun; 46(6):4426-4442. PubMed ID: 38241116
[TBL] [Abstract][Full Text] [Related]
12. Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of metabolic syndrome.
Morine MJ; McMonagle J; Toomey S; Reynolds CM; Moloney AP; Gormley IC; Gaora PO; Roche HM
BMC Bioinformatics; 2010 Oct; 11():499. PubMed ID: 20929581
[TBL] [Abstract][Full Text] [Related]
13. Network-based Pathway Enrichment Analysis.
Liu L; Ruan J
Proceedings (IEEE Int Conf Bioinformatics Biomed); 2013; ():218-221. PubMed ID: 25327472
[TBL] [Abstract][Full Text] [Related]
14. A novel signaling pathway impact analysis.
Tarca AL; Draghici S; Khatri P; Hassan SS; Mittal P; Kim JS; Kim CJ; Kusanovic JP; Romero R
Bioinformatics; 2009 Jan; 25(1):75-82. PubMed ID: 18990722
[TBL] [Abstract][Full Text] [Related]
15. GAGE: generally applicable gene set enrichment for pathway analysis.
Luo W; Friedman MS; Shedden K; Hankenson KD; Woolf PJ
BMC Bioinformatics; 2009 May; 10():161. PubMed ID: 19473525
[TBL] [Abstract][Full Text] [Related]
16. ToPASeq: an R package for topology-based pathway analysis of microarray and RNA-Seq data.
Ihnatova I; Budinska E
BMC Bioinformatics; 2015 Oct; 16():350. PubMed ID: 26514335
[TBL] [Abstract][Full Text] [Related]
17. GEOlimma: differential expression analysis and feature selection using pre-existing microarray data.
Lu L; Townsend KA; Daigle BJ
BMC Bioinformatics; 2021 Feb; 22(1):44. PubMed ID: 33535967
[TBL] [Abstract][Full Text] [Related]
18. The Effectiveness of Integrated Care Pathways for Adults and Children in Health Care Settings: A Systematic Review.
Allen D; Gillen E; Rixson L
JBI Libr Syst Rev; 2009; 7(3):80-129. PubMed ID: 27820426
[TBL] [Abstract][Full Text] [Related]
19. Modeling osteosarcoma progression by measuring the connectivity dynamics using an inference of multiple differential modules algorithm.
Liu B; Zhang Z; Dai EN; Tian JX; Xin JZ; Xu L
Mol Med Rep; 2017 Aug; 16(2):1047-1054. PubMed ID: 28586048
[TBL] [Abstract][Full Text] [Related]
20. A novel dysregulated pathway-identification analysis based on global influence of within-pathway effects and crosstalk between pathways.
Han J; Li C; Yang H; Xu Y; Zhang C; Ma J; Shi X; Liu W; Shang D; Yao Q; Zhang Y; Su F; Feng L; Li X
J R Soc Interface; 2015 Jan; 12(102):20140937. PubMed ID: 25551156
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
