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2. ChIP-Seq: a method for global identification of regulatory elements in the genome. Raha D; Hong M; Snyder M Curr Protoc Mol Biol; 2010 Jul; Chapter 21():Unit 21.19.1-14. PubMed ID: 20583098 [TBL] [Abstract][Full Text] [Related]
3. The ChIP-exo Method: Identifying Protein-DNA Interactions with Near Base Pair Precision. Perreault AA; Venters BJ J Vis Exp; 2016 Dec; (118):. PubMed ID: 28060339 [TBL] [Abstract][Full Text] [Related]
4. Precise Identification of DNA-Binding Proteins Genomic Location by Exonuclease Coupled Chromatin Immunoprecipitation (ChIP-exo). Matteau D; Rodrigue S Methods Mol Biol; 2015; 1334():173-93. PubMed ID: 26404150 [TBL] [Abstract][Full Text] [Related]
5. MACE: model based analysis of ChIP-exo. Wang L; Chen J; Wang C; Uusküla-Reimand L; Chen K; Medina-Rivera A; Young EJ; Zimmermann MT; Yan H; Sun Z; Zhang Y; Wu ST; Huang H; Wilson MD; Kocher JP; Li W Nucleic Acids Res; 2014 Nov; 42(20):e156. PubMed ID: 25249628 [TBL] [Abstract][Full Text] [Related]
6. Global analysis of transcription factor-binding sites in yeast using ChIP-Seq. Lefrançois P; Gallagher JE; Snyder M Methods Mol Biol; 2014; 1205():231-55. PubMed ID: 25213249 [TBL] [Abstract][Full Text] [Related]
7. High-Resolution Mapping of Protein-DNA Interactions in Mouse Stem Cell-Derived Neurons using Chromatin Immunoprecipitation-Exonuclease (ChIP-Exo). Montanera KN; Rhee HS J Vis Exp; 2020 Aug; (162):. PubMed ID: 32865524 [TBL] [Abstract][Full Text] [Related]
9. ChIP-Seq using high-throughput DNA sequencing for genome-wide identification of transcription factor binding sites. Lefrançois P; Zheng W; Snyder M Methods Enzymol; 2010; 470():77-104. PubMed ID: 20946807 [TBL] [Abstract][Full Text] [Related]
10. The ChIP-Exo Method to Identify Genomic Locations of DNA-Binding Proteins at Near Single Base-Pair Resolution. Yeh SY; Rhee HS Methods Mol Biol; 2023; 2599():33-48. PubMed ID: 36427141 [TBL] [Abstract][Full Text] [Related]
11. High-Resolution Chromatin Immunoprecipitation: ChIP-Sequencing. Diaz RE; Sanchez A; Anton Le Berre V; Bouet JY Methods Mol Biol; 2017; 1624():61-73. PubMed ID: 28842876 [TBL] [Abstract][Full Text] [Related]
12. DNA-Binding Factor Target Identification by Chromatin Immunoprecipitation (ChIP) in Plants. Posé D; Yant L Methods Mol Biol; 2016; 1363():25-35. PubMed ID: 26577778 [TBL] [Abstract][Full Text] [Related]
13. ChIP-Seq Analysis in Neurospora crassa. Ferraro AR; Lewis ZA Methods Mol Biol; 2018; 1775():241-250. PubMed ID: 29876822 [TBL] [Abstract][Full Text] [Related]
14. ChIPseq in Yeast Species: From Chromatin Immunoprecipitation to High-Throughput Sequencing and Bioinformatics Data Analyses. Lelandais G; Blugeon C; Merhej J Methods Mol Biol; 2016; 1361():185-202. PubMed ID: 26483023 [TBL] [Abstract][Full Text] [Related]
15. Alignment and quantification of ChIP-exo crosslinking patterns reveal the spatial organization of protein-DNA complexes. Yamada N; Rossi MJ; Farrell N; Pugh BF; Mahony S Nucleic Acids Res; 2020 Nov; 48(20):11215-11226. PubMed ID: 32747934 [TBL] [Abstract][Full Text] [Related]
16. Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo. Aparicio O; Geisberg JV; Struhl K Curr Protoc Cell Biol; 2004 Sep; Chapter 17():Unit 17.7. PubMed ID: 18228445 [TBL] [Abstract][Full Text] [Related]