189 related articles for article (PubMed ID: 23029247)
1. Improving indel detection specificity of the Ion Torrent PGM benchtop sequencer.
Yeo ZX; Chan M; Yap YS; Ang P; Rozen S; Lee AS
PLoS One; 2012; 7(9):e45798. PubMed ID: 23029247
[TBL] [Abstract][Full Text] [Related]
2. Evaluation and optimisation of indel detection workflows for ion torrent sequencing of the BRCA1 and BRCA2 genes.
Yeo ZX; Wong JC; Rozen SG; Lee AS
BMC Genomics; 2014 Jun; 15(1):516. PubMed ID: 24962530
[TBL] [Abstract][Full Text] [Related]
3. Validation and optimization of the Ion Torrent S5 XL sequencer and Oncomine workflow for BRCA1 and BRCA2 genetic testing.
Shin S; Kim Y; Chul Oh S; Yu N; Lee ST; Rak Choi J; Lee KA
Oncotarget; 2017 May; 8(21):34858-34866. PubMed ID: 28422718
[TBL] [Abstract][Full Text] [Related]
4. Correlation between the number of false positive variants and the quality of results using Ion Torrent PGM™ sequencing to screen BRCA genes.
Gouvêa Moreira TC; Da Silva Spínola P; Campos Rezende M; Moreira de Freitas CS; Borges Mury F; Rodrigues Bonvicino C; De Andrade Agostinho L
Biomedica; 2021 Dec; 41(4):773-786. PubMed ID: 34936260
[TBL] [Abstract][Full Text] [Related]
5. Evaluation of the Ion Torrent PGM sequencing workflow for the routine rapid detection of BRCA1 and BRCA2 germline mutations.
Zanella I; Merola F; Biasiotto G; Archetti S; Spinelli E; Di Lorenzo D
Exp Mol Pathol; 2017 Apr; 102(2):314-320. PubMed ID: 28263838
[TBL] [Abstract][Full Text] [Related]
6. Comparison of Ion Personal Genome Machine Platforms for the Detection of Variants in
Hwang SM; Lee KC; Lee MS; Park KU
Cancer Res Treat; 2018 Jan; 50(1):255-264. PubMed ID: 28392550
[TBL] [Abstract][Full Text] [Related]
7. The challenge of detecting indels in bacterial genomes from short-read sequencing data.
Steglich M; Nübel U
J Biotechnol; 2017 May; 250():11-15. PubMed ID: 28267569
[TBL] [Abstract][Full Text] [Related]
8. SiNVICT: ultra-sensitive detection of single nucleotide variants and indels in circulating tumour DNA.
Kockan C; Hach F; Sarrafi I; Bell RH; McConeghy B; Beja K; Haegert A; Wyatt AW; Volik SV; Chi KN; Collins CC; Sahinalp SC
Bioinformatics; 2017 Jan; 33(1):26-34. PubMed ID: 27531099
[TBL] [Abstract][Full Text] [Related]
9. Development of a next-generation sequencing method for BRCA mutation screening: a comparison between a high-throughput and a benchtop platform.
Chan M; Ji SM; Yeo ZX; Gan L; Yap E; Yap YS; Ng R; Tan PH; Ho GH; Ang P; Lee AS
J Mol Diagn; 2012 Nov; 14(6):602-12. PubMed ID: 22921312
[TBL] [Abstract][Full Text] [Related]
10. Dindel: accurate indel calls from short-read data.
Albers CA; Lunter G; MacArthur DG; McVean G; Ouwehand WH; Durbin R
Genome Res; 2011 Jun; 21(6):961-73. PubMed ID: 20980555
[TBL] [Abstract][Full Text] [Related]
11. Development and Validation of a Next-Generation Sequencing Assay for BRCA1 and BRCA2 Variants for the Clinical Laboratory.
Strom CM; Rivera S; Elzinga C; Angeloni T; Rosenthal SH; Goos-Root D; Siaw M; Platt J; Braastadt C; Cheng L; Ross D; Sun W
PLoS One; 2015; 10(8):e0136419. PubMed ID: 26295337
[TBL] [Abstract][Full Text] [Related]
12. Evaluation of an amplicon-based next-generation sequencing panel for detection of BRCA1 and BRCA2 genetic variants.
Shin S; Hwang IS; Lee ST; Choi JR
Breast Cancer Res Treat; 2016 Aug; 158(3):433-40. PubMed ID: 27383479
[TBL] [Abstract][Full Text] [Related]
13. Detection of false positive mutations in BRCA gene by next generation sequencing.
Suryavanshi M; Kumar D; Panigrahi MK; Chowdhary M; Mehta A
Fam Cancer; 2017 Jul; 16(3):311-317. PubMed ID: 27848044
[TBL] [Abstract][Full Text] [Related]
14. Comparative assessments of indel annotations in healthy and cancer genomes with next-generation sequencing data.
Chen J; Guo JT
BMC Med Genomics; 2020 Nov; 13(1):170. PubMed ID: 33167946
[TBL] [Abstract][Full Text] [Related]
15. Streamlined ion torrent PGM-based diagnostics: BRCA1 and BRCA2 genes as a model.
Tarabeux J; Zeitouni B; Moncoutier V; Tenreiro H; Abidallah K; Lair S; Legoix-Né P; Leroy Q; Rouleau E; Golmard L; Barillot E; Stern MH; Rio-Frio T; Stoppa-Lyonnet D; Houdayer C
Eur J Hum Genet; 2014 Apr; 22(4):535-41. PubMed ID: 23942203
[TBL] [Abstract][Full Text] [Related]
16. New recurrent BRCA1/2 mutations in Polish patients with familial breast/ovarian cancer detected by next generation sequencing.
Kluska A; Balabas A; Paziewska A; Kulecka M; Nowakowska D; Mikula M; Ostrowski J
BMC Med Genomics; 2015 May; 8():19. PubMed ID: 25948282
[TBL] [Abstract][Full Text] [Related]
17. Optimized detection of insertions/deletions (INDELs) in whole-exome sequencing data.
Kim BY; Park JH; Jo HY; Koo SK; Park MH
PLoS One; 2017; 12(8):e0182272. PubMed ID: 28792971
[TBL] [Abstract][Full Text] [Related]
18. Performance evaluation of indel calling tools using real short-read data.
Hasan MS; Wu X; Zhang L
Hum Genomics; 2015 Aug; 9(1):20. PubMed ID: 26286629
[TBL] [Abstract][Full Text] [Related]
19. INDELseek: detection of complex insertions and deletions from next-generation sequencing data.
Au CH; Leung AY; Kwong A; Chan TL; Ma ES
BMC Genomics; 2017 Jan; 18(1):16. PubMed ID: 28056804
[TBL] [Abstract][Full Text] [Related]
20. Validation of a next generation sequencing assay for BRCA1, BRCA2, CHEK2 and PALB2 genetic testing.
Sim WC; Lee CY; Richards R; Bettens K; Mottier V; Goh LL
Exp Mol Pathol; 2020 Oct; 116():104483. PubMed ID: 32531196
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]