BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

142 related articles for article (PubMed ID: 23034764)

  • 1. Coarse-grained models for protein folding and aggregation.
    Derreumaux P
    Methods Mol Biol; 2013; 924():585-600. PubMed ID: 23034764
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The coarse-grained OPEP force field for non-amyloid and amyloid proteins.
    Chebaro Y; Pasquali S; Derreumaux P
    J Phys Chem B; 2012 Aug; 116(30):8741-52. PubMed ID: 22742737
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Coarse-grained simulations of protein aggregation.
    Cellmer T; Fawzi NL
    Methods Mol Biol; 2012; 899():453-70. PubMed ID: 22735969
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Coarse-grained protein model with residue orientation energies derived from atomic force fields.
    Betancourt MR
    J Phys Chem B; 2009 Nov; 113(44):14824-30. PubMed ID: 19817469
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Coarse-grained models of protein folding: toy models or predictive tools?
    Clementi C
    Curr Opin Struct Biol; 2008 Feb; 18(1):10-5. PubMed ID: 18160277
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Deciphering the timescales and mechanisms of protein folding using minimal off-lattice models.
    Thirumalai D; Klimov DK
    Curr Opin Struct Biol; 1999 Apr; 9(2):197-207. PubMed ID: 10322218
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Aggregation drives "misfolding" in protein amyloid fiber formation.
    Xu S
    Amyloid; 2007 Jun; 14(2):119-31. PubMed ID: 17577685
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Folding and stability of helical bundle proteins from coarse-grained models.
    Kapoor A; Travesset A
    Proteins; 2013 Jul; 81(7):1200-11. PubMed ID: 23426892
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Cooperativity, local-nonlocal coupling, and nonnative interactions: principles of protein folding from coarse-grained models.
    Chan HS; Zhang Z; Wallin S; Liu Z
    Annu Rev Phys Chem; 2011; 62():301-26. PubMed ID: 21453060
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structures and thermodynamics of Alzheimer's amyloid-beta Abeta(16-35) monomer and dimer by replica exchange molecular dynamics simulations: implication for full-length Abeta fibrillation.
    Chebaro Y; Mousseau N; Derreumaux P
    J Phys Chem B; 2009 May; 113(21):7668-75. PubMed ID: 19415895
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Protein folding simulations: from coarse-grained model to all-atom model.
    Zhang J; Li W; Wang J; Qin M; Wu L; Yan Z; Xu W; Zuo G; Wang W
    IUBMB Life; 2009 Jun; 61(6):627-43. PubMed ID: 19472192
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Ab initio discrete molecular dynamics approach to protein folding and aggregation.
    Urbanc B; Borreguero JM; Cruz L; Stanley HE
    Methods Enzymol; 2006; 412():314-38. PubMed ID: 17046666
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Self-folding and aggregation of amyloid nanofibrils.
    Paparcone R; Cranford SW; Buehler MJ
    Nanoscale; 2011 Apr; 3(4):1748-55. PubMed ID: 21347488
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Aggregation of fibrils and plaques in amyloid molecular systems.
    Nicodemi M; de Candia A; Coniglio A
    Phys Rev E Stat Nonlin Soft Matter Phys; 2009 Oct; 80(4 Pt 1):041914. PubMed ID: 19905349
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Determination of pair-wise inter-residue interaction forces from folding pathways and their implementation in coarse-grained folding prediction.
    Baday S; Erman B; Arkun Y
    Phys Chem Chem Phys; 2009 Mar; 11(12):1949-61. PubMed ID: 19280006
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Beta-hairpin folding by a model amyloid peptide in solution and at an interface.
    Knecht V
    J Phys Chem B; 2008 Aug; 112(31):9476-83. PubMed ID: 18593146
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Study of the Villin headpiece folding dynamics by combining coarse-grained Monte Carlo evolution and all-atom molecular dynamics.
    De Mori GM; Colombo G; Micheletti C
    Proteins; 2005 Feb; 58(2):459-71. PubMed ID: 15521059
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Studies of folding and misfolding using simplified models.
    Dokholyan NV
    Curr Opin Struct Biol; 2006 Feb; 16(1):79-85. PubMed ID: 16413773
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Coarse-grained models: getting more with less.
    Rader AJ
    Curr Opin Pharmacol; 2010 Dec; 10(6):753-9. PubMed ID: 20888293
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Diversity of kinetic pathways in amyloid fibril formation.
    Bellesia G; Shea JE
    J Chem Phys; 2009 Sep; 131(11):111102. PubMed ID: 19778093
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.