These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
5. Linking human diseases to animal models using ontology-based phenotype annotation. Washington NL; Haendel MA; Mungall CJ; Ashburner M; Westerfield M; Lewis SE PLoS Biol; 2009 Nov; 7(11):e1000247. PubMed ID: 19956802 [TBL] [Abstract][Full Text] [Related]
6. Dione: An OWL representation of ICD-10-CM for classifying patients' diseases. Roldán-García MD; García-Godoy MJ; Aldana-Montes JF J Biomed Semantics; 2016 Oct; 7(1):62. PubMed ID: 27737720 [TBL] [Abstract][Full Text] [Related]
7. Automatically transforming pre- to post-composed phenotypes: EQ-lising HPO and MP. Oellrich A; Grabmüller C; Rebholz-Schuhmann D J Biomed Semantics; 2013 Oct; 4(1):29. PubMed ID: 24131519 [TBL] [Abstract][Full Text] [Related]
8. Practical application of ontologies to annotate and analyse large scale raw mouse phenotype data. Beck T; Morgan H; Blake A; Wells S; Hancock JM; Mallon AM BMC Bioinformatics; 2009 May; 10 Suppl 5(Suppl 5):S2. PubMed ID: 19426459 [TBL] [Abstract][Full Text] [Related]
9. Relations as patterns: bridging the gap between OBO and OWL. Hoehndorf R; Oellrich A; Dumontier M; Kelso J; Rebholz-Schuhmann D; Herre H BMC Bioinformatics; 2010 Aug; 11():441. PubMed ID: 20807438 [TBL] [Abstract][Full Text] [Related]
10. Structuring, reuse and analysis of electronic dental data using the Oral Health and Disease Ontology. Duncan WD; Thyvalikakath T; Haendel M; Torniai C; Hernandez P; Song M; Acharya A; Caplan DJ; Schleyer T; Ruttenberg A J Biomed Semantics; 2020 Aug; 11(1):8. PubMed ID: 32819435 [TBL] [Abstract][Full Text] [Related]
11. Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies. Samwald M; Miñarro Giménez JA; Boyce RD; Freimuth RR; Adlassnig KP; Dumontier M BMC Med Inform Decis Mak; 2015 Feb; 15():12. PubMed ID: 25880555 [TBL] [Abstract][Full Text] [Related]
12. Aber-OWL: a framework for ontology-based data access in biology. Hoehndorf R; Slater L; Schofield PN; Gkoutos GV BMC Bioinformatics; 2015 Jan; 16():26. PubMed ID: 25627673 [TBL] [Abstract][Full Text] [Related]
13. Querying phenotype-genotype relationships on patient datasets using semantic web technology: the example of Cerebrotendinous xanthomatosis. Taboada M; Martínez D; Pilo B; Jiménez-Escrig A; Robinson PN; Sobrido MJ BMC Med Inform Decis Mak; 2012 Jul; 12():78. PubMed ID: 22849591 [TBL] [Abstract][Full Text] [Related]
15. Ontology patterns for the representation of quality changes of cells in time. Burek P; Scherf N; Herre H J Biomed Semantics; 2019 Oct; 10(1):16. PubMed ID: 31619282 [TBL] [Abstract][Full Text] [Related]
16. Challenges in converting frame-based ontology into OWL: the Foundational Model of Anatomy case-study. Dameron O; Rubin DL; Musen MA AMIA Annu Symp Proc; 2005; 2005():181-5. PubMed ID: 16779026 [TBL] [Abstract][Full Text] [Related]
17. Ontological interpretation of biomedical database content. Santana da Silva F; Jansen L; Freitas F; Schulz S J Biomed Semantics; 2017 Jun; 8(1):24. PubMed ID: 28651575 [TBL] [Abstract][Full Text] [Related]
18. OWL 2 learn profile: an ontology sublanguage for the learning domain. Heiyanthuduwage SR; Schwitter R; Orgun MA Springerplus; 2016; 5():291. PubMed ID: 27066328 [TBL] [Abstract][Full Text] [Related]
19. OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction. Smaili FZ; Gao X; Hoehndorf R Bioinformatics; 2019 Jun; 35(12):2133-2140. PubMed ID: 30407490 [TBL] [Abstract][Full Text] [Related]
20. Identifying Principles for the Construction of an Ontology-Based Knowledge Base: A Case Study Approach. Jing X; Hardiker NR; Kay S; Gao Y JMIR Med Inform; 2018 Dec; 6(4):e52. PubMed ID: 30578220 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]