These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
209 related articles for article (PubMed ID: 23049488)
1. GPU/CPU Algorithm for Generalized Born/Solvent-Accessible Surface Area Implicit Solvent Calculations. Tanner DE; Phillips JC; Schulten K J Chem Theory Comput; 2012 Jul; 8(7):2521-2530. PubMed ID: 23049488 [TBL] [Abstract][Full Text] [Related]
2. A hybrid CPU/GPU method for Hartree-Fock self-consistent-field calculation. Qi J; Zhang Y; Yang M J Chem Phys; 2023 Sep; 159(10):. PubMed ID: 37681693 [TBL] [Abstract][Full Text] [Related]
3. Accelerating the Generalized Born with Molecular Volume and Solvent Accessible Surface Area Implicit Solvent Model Using Graphics Processing Units. Gong X; Chiricotto M; Liu X; Nordquist E; Feig M; Brooks CL; Chen J J Comput Chem; 2020 Mar; 41(8):830-838. PubMed ID: 31875339 [TBL] [Abstract][Full Text] [Related]
4. Exact Analytical Algorithm for the Solvent-Accessible Surface Area and Derivatives in Implicit Solvent Molecular Simulations on GPUs. Cao X; Hummel MH; Wang Y; Simmerling C; Coutsias EA J Chem Theory Comput; 2024 Jun; 20(11):4456-4468. PubMed ID: 38780181 [TBL] [Abstract][Full Text] [Related]
5. Exact analytical algorithm for solvent accessible surface area and derivatives in implicit solvent molecular simulations on GPUs. Cao X; Hummel MH; Wang Y; Simmerling C; Coutsias EA ArXiv; 2024 Apr; ():. PubMed ID: 38313200 [TBL] [Abstract][Full Text] [Related]
6. Efficient methods for implementation of multi-level nonrigid mass-preserving image registration on GPUs and multi-threaded CPUs. Ellingwood ND; Yin Y; Smith M; Lin CL Comput Methods Programs Biomed; 2016 Apr; 127():290-300. PubMed ID: 26776541 [TBL] [Abstract][Full Text] [Related]
7. Accelerating Coupled-Cluster Calculations with GPUs: An Implementation of the Density-Fitted CCSD(T) Approach for Heterogeneous Computing Architectures Using OpenMP Directives. Datta D; Gordon MS J Chem Theory Comput; 2023 Nov; 19(21):7640-7657. PubMed ID: 37878756 [TBL] [Abstract][Full Text] [Related]
8. CPU-GPU hybrid accelerating the Zuker algorithm for RNA secondary structure prediction applications. Lei G; Dou Y; Wan W; Xia F; Li R; Ma M; Zou D BMC Genomics; 2012; 13 Suppl 1(Suppl 1):S14. PubMed ID: 22369626 [TBL] [Abstract][Full Text] [Related]
9. Fast on-site Monte Carlo tool for dose calculations in CT applications. Chen W; Kolditz D; Beister M; Bohle R; Kalender WA Med Phys; 2012 Jun; 39(6):2985-96. PubMed ID: 22755683 [TBL] [Abstract][Full Text] [Related]
10. Exploiting graphics processing units for computational biology and bioinformatics. Payne JL; Sinnott-Armstrong NA; Moore JH Interdiscip Sci; 2010 Sep; 2(3):213-20. PubMed ID: 20658333 [TBL] [Abstract][Full Text] [Related]
11. Hybrid CPU/GPU Integral Engine for Strong-Scaling Ab Initio Methods. Kussmann J; Ochsenfeld C J Chem Theory Comput; 2017 Jul; 13(7):3153-3159. PubMed ID: 28636392 [TBL] [Abstract][Full Text] [Related]
12. Accelerating Large Scale Image Analyses on Parallel, CPU-GPU Equipped Systems. Teodoro G; Kurc TM; Pan T; Cooper LA; Kong J; Widener P; Saltz JH Proc IPDPS (Conf); 2012 May; 2012():1093-1104. PubMed ID: 25419545 [TBL] [Abstract][Full Text] [Related]
13. Accelerated Molecular Mechanical and Solvation Energetics on Multicore CPUs and Manycore GPUs. Cha D; Rand A; Zhang Q; Chowdhury RA; Tithi JJ; Bajaj C ACM BCB; 2015 Sep; 2015():222-231. PubMed ID: 32647834 [TBL] [Abstract][Full Text] [Related]
14. Parallelized computation for computer simulation of electrocardiograms using personal computers with multi-core CPU and general-purpose GPU. Shen W; Wei D; Xu W; Zhu X; Yuan S Comput Methods Programs Biomed; 2010 Oct; 100(1):87-96. PubMed ID: 20674066 [TBL] [Abstract][Full Text] [Related]
15. High performance computing for deformable image registration: towards a new paradigm in adaptive radiotherapy. Samant SS; Xia J; Muyan-Ozcelik P; Owens JD Med Phys; 2008 Aug; 35(8):3546-53. PubMed ID: 18777915 [TBL] [Abstract][Full Text] [Related]
16. A Hybrid CPU/GPU Pattern-Matching Algorithm for Deep Packet Inspection. Lee CL; Lin YS; Chen YC PLoS One; 2015; 10(10):e0139301. PubMed ID: 26437335 [TBL] [Abstract][Full Text] [Related]
17. Multi-GPU implementation of a VMAT treatment plan optimization algorithm. Tian Z; Peng F; Folkerts M; Tan J; Jia X; Jiang SB Med Phys; 2015 Jun; 42(6):2841-52. PubMed ID: 26127037 [TBL] [Abstract][Full Text] [Related]
18. Large-scale neural circuit mapping data analysis accelerated with the graphical processing unit (GPU). Shi Y; Veidenbaum AV; Nicolau A; Xu X J Neurosci Methods; 2015 Jan; 239():1-10. PubMed ID: 25277633 [TBL] [Abstract][Full Text] [Related]
19. A GPU solvent-solvent interaction calculation accelerator for biomolecular simulations using the GROMOS software. Schmid N; Bötschi M; van Gunsteren WF J Comput Chem; 2010 Jun; 31(8):1636-43. PubMed ID: 20127715 [TBL] [Abstract][Full Text] [Related]