BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

238 related articles for article (PubMed ID: 23067368)

  • 21. Interplay of 'induced fit' and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch.
    Noeske J; Buck J; Fürtig B; Nasiri HR; Schwalbe H; Wöhnert J
    Nucleic Acids Res; 2007; 35(2):572-83. PubMed ID: 17175531
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Ligand-modulated folding of the full-length adenine riboswitch probed by NMR and single-molecule FRET spectroscopy.
    Warhaut S; Mertinkus KR; Höllthaler P; Fürtig B; Heilemann M; Hengesbach M; Schwalbe H
    Nucleic Acids Res; 2017 May; 45(9):5512-5522. PubMed ID: 28204648
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation.
    Steinert H; Sochor F; Wacker A; Buck J; Helmling C; Hiller F; Keyhani S; Noeske J; Grimm S; Rudolph MM; Keller H; Mooney RA; Landick R; Suess B; Fürtig B; Wöhnert J; Schwalbe H
    Elife; 2017 May; 6():. PubMed ID: 28541183
    [TBL] [Abstract][Full Text] [Related]  

  • 24. An energetically beneficial leader-linker interaction abolishes ligand-binding cooperativity in glycine riboswitches.
    Sherman EM; Esquiaqui J; Elsayed G; Ye JD
    RNA; 2012 Mar; 18(3):496-507. PubMed ID: 22279151
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Single-molecule FRET reveals the energy landscape of the full-length SAM-I riboswitch.
    Manz C; Kobitski AY; Samanta A; Keller BG; Jäschke A; Nienhaus GU
    Nat Chem Biol; 2017 Nov; 13(11):1172-1178. PubMed ID: 28920931
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Analysis of lysine recognition and specificity of the Bacillus subtilis L box riboswitch.
    Wilson-Mitchell SN; Grundy FJ; Henkin TM
    Nucleic Acids Res; 2012 Jul; 40(12):5706-17. PubMed ID: 22416067
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Unprecedented tunability of riboswitch structure and regulatory function by sub-millimolar variations in physiological Mg2.
    McCluskey K; Boudreault J; St-Pierre P; Perez-Gonzalez C; Chauvier A; Rizzi A; Beauregard PB; Lafontaine DA; Penedo JC
    Nucleic Acids Res; 2019 Jul; 47(12):6478-6487. PubMed ID: 31045204
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Nucleotides adjacent to the ligand-binding pocket are linked to activity tuning in the purine riboswitch.
    Stoddard CD; Widmann J; Trausch JJ; Marcano-Velázquez JG; Knight R; Batey RT
    J Mol Biol; 2013 May; 425(10):1596-611. PubMed ID: 23485418
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Effect of Sequence on the Interactions of Divalent Cations with M-Box Riboswitches from
    Bahoua B; Sevdalis SE; Soto AM
    Biochemistry; 2021 Sep; 60(37):2781-2794. PubMed ID: 34472844
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Trans-acting glmS catalytic riboswitch: locked and loaded.
    Tinsley RA; Furchak JR; Walter NG
    RNA; 2007 Apr; 13(4):468-77. PubMed ID: 17283212
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Microsecond Folding of preQ
    Sarkar B; Ishii K; Tahara T
    J Am Chem Soc; 2021 Jun; 143(21):7968-7978. PubMed ID: 34013733
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Ligand binding by the tandem glycine riboswitch depends on aptamer dimerization but not double ligand occupancy.
    Ruff KM; Strobel SA
    RNA; 2014 Nov; 20(11):1775-88. PubMed ID: 25246650
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Insights into ligand binding to PreQ1 Riboswitch Aptamer from molecular dynamics simulations.
    Gong Z; Zhao Y; Chen C; Duan Y; Xiao Y
    PLoS One; 2014; 9(3):e92247. PubMed ID: 24663240
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Structural analysis of a class III preQ1 riboswitch reveals an aptamer distant from a ribosome-binding site regulated by fast dynamics.
    Liberman JA; Suddala KC; Aytenfisu A; Chan D; Belashov IA; Salim M; Mathews DH; Spitale RC; Walter NG; Wedekind JE
    Proc Natl Acad Sci U S A; 2015 Jul; 112(27):E3485-94. PubMed ID: 26106162
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Fluorogenic aptamers resolve the flexibility of RNA junctions using orientation-dependent FRET.
    Jeng SCY; Trachman RJ; Weissenboeck F; Truong L; Link KA; Jepsen MDE; Knutson JR; Andersen ES; Ferré-D'Amaré AR; Unrau PJ
    RNA; 2021 Apr; 27(4):433-444. PubMed ID: 33376189
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Molecular insights into the ligand-controlled organization of the SAM-I riboswitch.
    Heppell B; Blouin S; Dussault AM; Mulhbacher J; Ennifar E; Penedo JC; Lafontaine DA
    Nat Chem Biol; 2011 Jun; 7(6):384-92. PubMed ID: 21532599
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Identification of a tertiary interaction important for cooperative ligand binding by the glycine riboswitch.
    Erion TV; Strobel SA
    RNA; 2011 Jan; 17(1):74-84. PubMed ID: 21098652
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Comparison of a preQ1 riboswitch aptamer in metabolite-bound and free states with implications for gene regulation.
    Jenkins JL; Krucinska J; McCarty RM; Bandarian V; Wedekind JE
    J Biol Chem; 2011 Jul; 286(28):24626-37. PubMed ID: 21592962
    [TBL] [Abstract][Full Text] [Related]  

  • 39. A bacterial riboswitch class for the thiamin precursor HMP-PP employs a terminator-embedded aptamer.
    Atilho RM; Mirihana Arachchilage G; Greenlee EB; Knecht KM; Breaker RR
    Elife; 2019 Apr; 8():. PubMed ID: 30950790
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Recognition of cyclic-di-GMP by a riboswitch conducts translational repression through masking the ribosome-binding site distant from the aptamer domain.
    Inuzuka S; Kakizawa H; Nishimura KI; Naito T; Miyazaki K; Furuta H; Matsumura S; Ikawa Y
    Genes Cells; 2018 Jun; 23(6):435-447. PubMed ID: 29693296
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 12.