BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

182 related articles for article (PubMed ID: 23077539)

  • 1. Interactome-wide prediction of protein-protein binding sites reveals effects of protein sequence variation in Arabidopsis thaliana.
    Leal Valentim F; Neven F; Boyen P; van Dijk AD
    PLoS One; 2012; 7(10):e47022. PubMed ID: 23077539
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Sequence motifs in MADS transcription factors responsible for specificity and diversification of protein-protein interaction.
    van Dijk AD; Morabito G; Fiers M; van Ham RC; Angenent GC; Immink RG
    PLoS Comput Biol; 2010 Nov; 6(11):e1001017. PubMed ID: 21124869
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Evidence for network evolution in an Arabidopsis interactome map.
    Arabidopsis Interactome Mapping Consortium
    Science; 2011 Jul; 333(6042):601-7. PubMed ID: 21798944
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evolutionary rate and duplicability in the Arabidopsis thaliana protein-protein interaction network.
    Alvarez-Ponce D; Fares MA
    Genome Biol Evol; 2012; 4(12):1263-74. PubMed ID: 23160177
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana.
    Lehti-Shiu MD; Uygun S; Moghe GD; Panchy N; Fang L; Hufnagel DE; Jasicki HL; Feig M; Shiu SH
    Plant Physiol; 2015 Aug; 168(4):1717-34. PubMed ID: 26103993
    [TBL] [Abstract][Full Text] [Related]  

  • 6. AtPID: Arabidopsis thaliana protein interactome database--an integrative platform for plant systems biology.
    Cui J; Li P; Li G; Xu F; Zhao C; Li Y; Yang Z; Wang G; Yu Q; Li Y; Shi T
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D999-1008. PubMed ID: 17962307
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Global protein interactome exploration through mining genome-scale data in Arabidopsis thaliana.
    Xu F; Li G; Zhao C; Li Y; Li P; Cui J; Deng Y; Shi T
    BMC Genomics; 2010 Nov; 11 Suppl 2(Suppl 2):S2. PubMed ID: 21047383
    [TBL] [Abstract][Full Text] [Related]  

  • 8. LRR conservation mapping to predict functional sites within protein leucine-rich repeat domains.
    Helft L; Reddy V; Chen X; Koller T; Federici L; Fernández-Recio J; Gupta R; Bent A
    PLoS One; 2011; 6(7):e21614. PubMed ID: 21789174
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression.
    De Bodt S; Proost S; Vandepoele K; Rouzé P; Van de Peer Y
    BMC Genomics; 2009 Jun; 10():288. PubMed ID: 19563678
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A kaleidoscopic view of the Arabidopsis core cell cycle interactome.
    Van Leene J; Boruc J; De Jaeger G; Russinova E; De Veylder L
    Trends Plant Sci; 2011 Mar; 16(3):141-50. PubMed ID: 21233003
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Correlated mutations via regularized multinomial regression.
    Sreekumar J; ter Braak CJ; van Ham RC; van Dijk AD
    BMC Bioinformatics; 2011 Nov; 12():444. PubMed ID: 22082126
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Duplicate gene divergence by changes in microRNA binding sites in Arabidopsis and Brassica.
    Wang S; Adams KL
    Genome Biol Evol; 2015 Feb; 7(3):646-55. PubMed ID: 25644246
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structures and Short Linear Motif of Disordered Transcription Factor Regions Provide Clues to the Interactome of the Cellular Hub Protein Radical-induced Cell Death1.
    O'Shea C; Staby L; Bendsen SK; Tidemand FG; Redsted A; Willemoës M; Kragelund BB; Skriver K
    J Biol Chem; 2017 Jan; 292(2):512-527. PubMed ID: 27881680
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Arabidopsis seryl-tRNA synthetase: the first crystal structure and novel protein interactor of plant aminoacyl-tRNA synthetase.
    Kekez M; Zanki V; Kekez I; Baranasic J; Hodnik V; Duchêne AM; Anderluh G; Gruic-Sovulj I; Matković-Čalogović D; Weygand-Durasevic I; Rokov-Plavec J
    FEBS J; 2019 Feb; 286(3):536-554. PubMed ID: 30570212
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP).
    Kim WK; Bolser DM; Park JH
    Bioinformatics; 2004 May; 20(7):1138-50. PubMed ID: 14764552
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Selection-driven divergence after gene duplication in Arabidopsis thaliana.
    Gossmann TI; Schmid KJ
    J Mol Evol; 2011 Oct; 73(3-4):153-65. PubMed ID: 21965041
    [TBL] [Abstract][Full Text] [Related]  

  • 17. PAH-domain-specific interactions of the Arabidopsis transcription coregulator SIN3-LIKE1 (SNL1) with telomere-binding protein 1 and ALWAYS EARLY2 Myb-DNA binding factors.
    Bowen AJ; Gonzalez D; Mullins JG; Bhatt AM; Martinez A; Conlan RS
    J Mol Biol; 2010 Feb; 395(5):937-49. PubMed ID: 19962994
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer.
    Dong S; Lau V; Song R; Ierullo M; Esteban E; Wu Y; Sivieng T; Nahal H; Gaudinier A; Pasha A; Oughtred R; Dolinski K; Tyers M; Brady SM; Grene R; Usadel B; Provart NJ
    Plant Physiol; 2019 Apr; 179(4):1893-1907. PubMed ID: 30679268
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Structural and functional analysis of VQ motif-containing proteins in Arabidopsis as interacting proteins of WRKY transcription factors.
    Cheng Y; Zhou Y; Yang Y; Chi YJ; Zhou J; Chen JY; Wang F; Fan B; Shi K; Zhou YH; Yu JQ; Chen Z
    Plant Physiol; 2012 Jun; 159(2):810-25. PubMed ID: 22535423
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling.
    Engelen S; Trojan LA; Sacquin-Mora S; Lavery R; Carbone A
    PLoS Comput Biol; 2009 Jan; 5(1):e1000267. PubMed ID: 19165315
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.