108 related articles for article (PubMed ID: 23080115)
1. Human protein-protein interaction prediction by a novel sequence-based co-evolution method: co-evolutionary divergence.
Hsin Liu C; Li KC; Yuan S
Bioinformatics; 2013 Jan; 29(1):92-8. PubMed ID: 23080115
[TBL] [Abstract][Full Text] [Related]
2. The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships.
Sato T; Yamanishi Y; Kanehisa M; Toh H
Bioinformatics; 2005 Sep; 21(17):3482-9. PubMed ID: 15994190
[TBL] [Abstract][Full Text] [Related]
3. Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP).
Kim WK; Bolser DM; Park JH
Bioinformatics; 2004 May; 20(7):1138-50. PubMed ID: 14764552
[TBL] [Abstract][Full Text] [Related]
4. Improved Prediction of Protein-Protein Interaction Mapping on
Islam MM; Alam MJ; Ahmed FF; Hasan MM; Mollah MNH
Protein Pept Lett; 2021; 28(1):74-83. PubMed ID: 32520672
[TBL] [Abstract][Full Text] [Related]
5. Prediction of protein-protein interactions from amino acid sequences using a novel multi-scale continuous and discontinuous feature set.
You ZH; Zhu L; Zheng CH; Yu HJ; Deng SP; Ji Z
BMC Bioinformatics; 2014; 15 Suppl 15(Suppl 15):S9. PubMed ID: 25474679
[TBL] [Abstract][Full Text] [Related]
6. On the quality of tree-based protein classification.
Lazareva-Ulitsky B; Diemer K; Thomas PD
Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
[TBL] [Abstract][Full Text] [Related]
7. Evolutionary analysis and interaction prediction for protein-protein interaction network in geometric space.
Huang L; Liao L; Wu CH
PLoS One; 2017; 12(9):e0183495. PubMed ID: 28886027
[TBL] [Abstract][Full Text] [Related]
8. RVMAB: Using the Relevance Vector Machine Model Combined with Average Blocks to Predict the Interactions of Proteins from Protein Sequences.
An JY; You ZH; Meng FR; Xu SJ; Wang Y
Int J Mol Sci; 2016 May; 17(5):. PubMed ID: 27213337
[TBL] [Abstract][Full Text] [Related]
9. Identification of functional modules from conserved ancestral protein-protein interactions.
Dutkowski J; Tiuryn J
Bioinformatics; 2007 Jul; 23(13):i149-58. PubMed ID: 17646291
[TBL] [Abstract][Full Text] [Related]
10. Improving protein complex prediction by reconstructing a high-confidence protein-protein interaction network of Escherichia coli from different physical interaction data sources.
Taghipour S; Zarrineh P; Ganjtabesh M; Nowzari-Dalini A
BMC Bioinformatics; 2017 Jan; 18(1):10. PubMed ID: 28049415
[TBL] [Abstract][Full Text] [Related]
11. Dynamically searching for a domain for protein function prediction.
Hou J; Jiang Y
J Bioinform Comput Biol; 2013 Aug; 11(4):1350008. PubMed ID: 23859272
[TBL] [Abstract][Full Text] [Related]
12. Estimating support for protein-protein interaction data with applications to function prediction.
Zeng E; Ding C; Narasimhan G; Holbrook SR
Comput Syst Bioinformatics Conf; 2008; 7():73-84. PubMed ID: 19642270
[TBL] [Abstract][Full Text] [Related]
13. Prediction of protein interaction based on similarity of phylogenetic trees.
Pazos F; Juan D; Izarzugaza JM; Leon E; Valencia A
Methods Mol Biol; 2008; 484():523-35. PubMed ID: 18592199
[TBL] [Abstract][Full Text] [Related]
14. Completing sparse and disconnected protein-protein network by deep learning.
Huang L; Liao L; Wu CH
BMC Bioinformatics; 2018 Mar; 19(1):103. PubMed ID: 29566671
[TBL] [Abstract][Full Text] [Related]
15. Modeling protein network evolution under genome duplication and domain shuffling.
Evlampiev K; Isambert H
BMC Syst Biol; 2007 Nov; 1():49. PubMed ID: 17999763
[TBL] [Abstract][Full Text] [Related]
16. Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome.
Pazos F; Ranea JA; Juan D; Sternberg MJ
J Mol Biol; 2005 Sep; 352(4):1002-15. PubMed ID: 16139301
[TBL] [Abstract][Full Text] [Related]
17. Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map).
Park D; Lee S; Bolser D; Schroeder M; Lappe M; Oh D; Bhak J
Bioinformatics; 2005 Aug; 21(15):3234-40. PubMed ID: 15914543
[TBL] [Abstract][Full Text] [Related]
18. Protein-protein interaction prediction by combined analysis of genomic and conservation information.
Emamjomeh A; Goliaei B; Torkamani A; Ebrahimpour R; Mohammadi N; Parsian A
Genes Genet Syst; 2014; 89(6):259-72. PubMed ID: 25948120
[TBL] [Abstract][Full Text] [Related]
19. A Cascade Random Forests Algorithm for Predicting Protein-Protein Interaction Sites.
Wei ZS; Yang JY; Shen HB; Yu DJ
IEEE Trans Nanobioscience; 2015 Oct; 14(7):746-60. PubMed ID: 26441427
[TBL] [Abstract][Full Text] [Related]
20. NetAlign: a web-based tool for comparison of protein interaction networks.
Liang Z; Xu M; Teng M; Niu L
Bioinformatics; 2006 Sep; 22(17):2175-7. PubMed ID: 16766562
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
