These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

375 related articles for article (PubMed ID: 23081734)

  • 21. ICPLQuant - A software for non-isobaric isotopic labeling proteomics.
    Brunner A; Keidel EM; Dosch D; Kellermann J; Lottspeich F
    Proteomics; 2010 Jan; 10(2):315-26. PubMed ID: 19953540
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Development and validation of a spectral library searching method for peptide identification from MS/MS.
    Lam H; Deutsch EW; Eddes JS; Eng JK; King N; Stein SE; Aebersold R
    Proteomics; 2007 Mar; 7(5):655-67. PubMed ID: 17295354
    [TBL] [Abstract][Full Text] [Related]  

  • 23. SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods.
    Chang C; Zhang J; Han M; Ma J; Zhang W; Wu S; Liu K; Xie H; He F; Zhu Y
    Bioinformatics; 2014 Feb; 30(4):586-7. PubMed ID: 24344194
    [TBL] [Abstract][Full Text] [Related]  

  • 24. A collection of open source applications for mass spectrometry data mining.
    Gallardo Ó; Ovelleiro D; Gay M; Carrascal M; Abian J
    Proteomics; 2014 Oct; 14(20):2275-9. PubMed ID: 25055762
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Automated generic analysis tools for protein quantitation using stable isotope labeling.
    Hsu WL; Sung TY
    Methods Mol Biol; 2010; 604():257-72. PubMed ID: 20013376
    [TBL] [Abstract][Full Text] [Related]  

  • 26. A comprehensive full factorial LC-MS/MS proteomics benchmark data set.
    Wessels HJ; Bloemberg TG; van Dael M; Wehrens R; Buydens LM; van den Heuvel LP; Gloerich J
    Proteomics; 2012 Aug; 12(14):2276-81. PubMed ID: 22887946
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Quantification of proteins by label-free LC-MS/MS.
    Levin Y; Bahn S
    Methods Mol Biol; 2010; 658():217-31. PubMed ID: 20839107
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Visual analysis of gel-free proteome data.
    Linsen L; Löcherbach J; Berth M; Becher D; Bernhardt J
    IEEE Trans Vis Comput Graph; 2006; 12(4):497-508. PubMed ID: 16805259
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Perfluorooctanoic acid and ammonium perfluorooctanoate: volatile surfactants for proteome analysis?
    Vieira DB; Crowell AM; Doucette AA
    Rapid Commun Mass Spectrom; 2012 Mar; 26(5):523-31. PubMed ID: 22302492
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Added value for tandem mass spectrometry shotgun proteomics data validation through isoelectric focusing of peptides.
    Heller M; Ye M; Michel PE; Morier P; Stalder D; Jünger MA; Aebersold R; Reymond F; Rossier JS
    J Proteome Res; 2005; 4(6):2273-82. PubMed ID: 16335976
    [TBL] [Abstract][Full Text] [Related]  

  • 31. IPeak: An open source tool to combine results from multiple MS/MS search engines.
    Wen B; Du C; Li G; Ghali F; Jones AR; Käll L; Xu S; Zhou R; Ren Z; Feng Q; Xu X; Wang J
    Proteomics; 2015 Sep; 15(17):2916-20. PubMed ID: 25951428
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Software pipeline and data analysis for MS/MS proteomics: the trans-proteomic pipeline.
    Keller A; Shteynberg D
    Methods Mol Biol; 2011; 694():169-89. PubMed ID: 21082435
    [TBL] [Abstract][Full Text] [Related]  

  • 33. MaxQuant Software for Ion Mobility Enhanced Shotgun Proteomics.
    Prianichnikov N; Koch H; Koch S; Lubeck M; Heilig R; Brehmer S; Fischer R; Cox J
    Mol Cell Proteomics; 2020 Jun; 19(6):1058-1069. PubMed ID: 32156793
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Search and decoy: the automatic identification of mass spectra.
    Eisenacher M; Kohl M; Turewicz M; Koch MH; Uszkoreit J; Stephan C
    Methods Mol Biol; 2012; 893():445-88. PubMed ID: 22665317
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Rapid and sensitive profiling and quantification of the human cell line proteome by LC-MS/MS without prefractionation.
    Yin X; Liu X; Zhang Y; Yan G; Wang F; Lu H; Shen H; Yang P
    Proteomics; 2014 Sep; 14(17-18):2008-16. PubMed ID: 25044409
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant.
    Yu F; Haynes SE; Teo GC; Avtonomov DM; Polasky DA; Nesvizhskii AI
    Mol Cell Proteomics; 2020 Sep; 19(9):1575-1585. PubMed ID: 32616513
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A practical guide to the ICPL_ESIQuant software for ICPL-based quantitative proteomics.
    Brunner A; Kellermann J; Lottspeich F
    Biochim Biophys Acta; 2014 Jan; 1844(1 Pt A):21-8. PubMed ID: 23454610
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Global proteome discovery using an online three-dimensional LC-MS/MS.
    Wei J; Sun J; Yu W; Jones A; Oeller P; Keller M; Woodnutt G; Short JM
    J Proteome Res; 2005; 4(3):801-8. PubMed ID: 15952726
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Mass spectrum sequential subtraction speeds up searching large peptide MS/MS spectra datasets against large nucleotide databases for proteogenomics.
    Helmy M; Sugiyama N; Tomita M; Ishihama Y
    Genes Cells; 2012 Aug; 17(8):633-44. PubMed ID: 22686349
    [TBL] [Abstract][Full Text] [Related]  

  • 40. BuildSummary: using a group-based approach to improve the sensitivity of peptide/protein identification in shotgun proteomics.
    Sheng Q; Dai J; Wu Y; Tang H; Zeng R
    J Proteome Res; 2012 Mar; 11(3):1494-502. PubMed ID: 22217156
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 19.