298 related articles for article (PubMed ID: 23110438)
1. Special features of RAD Sequencing data: implications for genotyping.
Davey JW; Cezard T; Fuentes-Utrilla P; Eland C; Gharbi K; Blaxter ML
Mol Ecol; 2013 Jun; 22(11):3151-64. PubMed ID: 23110438
[TBL] [Abstract][Full Text] [Related]
2. Deriving genotypes from RAD-seq short-read data using Stacks.
Rochette NC; Catchen JM
Nat Protoc; 2017 Dec; 12(12):2640-2659. PubMed ID: 29189774
[TBL] [Abstract][Full Text] [Related]
3. Estimating and accounting for genotyping errors in RAD-seq experiments.
Bresadola L; Link V; Buerkle CA; Lexer C; Wegmann D
Mol Ecol Resour; 2020 Jul; 20(4):856-870. PubMed ID: 32142201
[TBL] [Abstract][Full Text] [Related]
4. Amplification biases and consistent recovery of loci in a double-digest RAD-seq protocol.
DaCosta JM; Sorenson MD
PLoS One; 2014; 9(9):e106713. PubMed ID: 25188270
[TBL] [Abstract][Full Text] [Related]
5. Rapid SNP discovery and genetic mapping using sequenced RAD markers.
Baird NA; Etter PD; Atwood TS; Currey MC; Shiver AL; Lewis ZA; Selker EU; Cresko WA; Johnson EA
PLoS One; 2008; 3(10):e3376. PubMed ID: 18852878
[TBL] [Abstract][Full Text] [Related]
6. The effect of RAD allele dropout on the estimation of genetic variation within and between populations.
Gautier M; Gharbi K; Cezard T; Foucaud J; Kerdelhué C; Pudlo P; Cornuet JM; Estoup A
Mol Ecol; 2013 Jun; 22(11):3165-78. PubMed ID: 23110526
[TBL] [Abstract][Full Text] [Related]
7. RAD paired-end sequencing for local de novo assembly and SNP discovery in non-model organisms.
Etter PD; Johnson E
Methods Mol Biol; 2012; 888():135-51. PubMed ID: 22665280
[TBL] [Abstract][Full Text] [Related]
8. Meiotic maps of sockeye salmon derived from massively parallel DNA sequencing.
Everett MV; Miller MR; Seeb JE
BMC Genomics; 2012 Oct; 13():521. PubMed ID: 23031582
[TBL] [Abstract][Full Text] [Related]
9. QTL mapping using high-throughput sequencing.
Jamann TM; Balint-Kurti PJ; Holland JB
Methods Mol Biol; 2015; 1284():257-85. PubMed ID: 25757777
[TBL] [Abstract][Full Text] [Related]
10. SNP discovery and genotyping for evolutionary genetics using RAD sequencing.
Etter PD; Bassham S; Hohenlohe PA; Johnson EA; Cresko WA
Methods Mol Biol; 2011; 772():157-78. PubMed ID: 22065437
[TBL] [Abstract][Full Text] [Related]
11. Genome-wide genetic marker discovery and genotyping using next-generation sequencing.
Davey JW; Hohenlohe PA; Etter PD; Boone JQ; Catchen JM; Blaxter ML
Nat Rev Genet; 2011 Jun; 12(7):499-510. PubMed ID: 21681211
[TBL] [Abstract][Full Text] [Related]
12. Attack of the PCR clones: Rates of clonality have little effect on RAD-seq genotype calls.
Euclide PT; McKinney GJ; Bootsma M; Tarsa C; Meek MH; Larson WA
Mol Ecol Resour; 2020 Jan; 20(1):66-78. PubMed ID: 31479570
[TBL] [Abstract][Full Text] [Related]
13. Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms.
Recknagel H; Jacobs A; Herzyk P; Elmer KR
Mol Ecol Resour; 2015 Nov; 15(6):1316-29. PubMed ID: 25808755
[TBL] [Abstract][Full Text] [Related]
14. Population genomic analyses from low-coverage RAD-Seq data: a case study on the non-model cucurbit bottle gourd.
Xu P; Xu S; Wu X; Tao Y; Wang B; Wang S; Qin D; Lu Z; Li G
Plant J; 2014 Feb; 77(3):430-42. PubMed ID: 24320550
[TBL] [Abstract][Full Text] [Related]
15. Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing.
Hohenlohe PA; Day MD; Amish SJ; Miller MR; Kamps-Hughes N; Boyer MC; Muhlfeld CC; Allendorf FW; Johnson EA; Luikart G
Mol Ecol; 2013 Jun; 22(11):3002-13. PubMed ID: 23432212
[TBL] [Abstract][Full Text] [Related]
16. Construction of a high-density genetic map for grape using next generation restriction-site associated DNA sequencing.
Wang N; Fang L; Xin H; Wang L; Li S
BMC Plant Biol; 2012 Aug; 12():148. PubMed ID: 22908993
[TBL] [Abstract][Full Text] [Related]
17. Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics.
Harvey MG; Smith BT; Glenn TC; Faircloth BC; Brumfield RT
Syst Biol; 2016 Sep; 65(5):910-24. PubMed ID: 27288477
[TBL] [Abstract][Full Text] [Related]
18. An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing.
Wei Q; Wang Y; Qin X; Zhang Y; Zhang Z; Wang J; Li J; Lou Q; Chen J
BMC Genomics; 2014 Dec; 15(1):1158. PubMed ID: 25534138
[TBL] [Abstract][Full Text] [Related]
19. Going where traditional markers have not gone before: utility of and promise for RAD sequencing in marine invertebrate phylogeography and population genomics.
Reitzel AM; Herrera S; Layden MJ; Martindale MQ; Shank TM
Mol Ecol; 2013 Jun; 22(11):2953-70. PubMed ID: 23473066
[TBL] [Abstract][Full Text] [Related]
20. Two different high throughput sequencing approaches identify thousands of de novo genomic markers for the genetically depleted Bornean elephant.
Sharma R; Goossens B; Kun-Rodrigues C; Teixeira T; Othman N; Boone JQ; Jue NK; Obergfell C; O'Neill RJ; Chikhi L
PLoS One; 2012; 7(11):e49533. PubMed ID: 23185354
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]