These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

306 related articles for article (PubMed ID: 23114024)

  • 1. Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes.
    Kaas RS; Friis C; Ussery DW; Aarestrup FM
    BMC Genomics; 2012 Oct; 13():577. PubMed ID: 23114024
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A phylogenomic analysis of Escherichia coli / Shigella group: implications of genomic features associated with pathogenicity and ecological adaptation.
    Zhang Y; Lin K
    BMC Evol Biol; 2012 Sep; 12():174. PubMed ID: 22958895
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Phylomark, a tool to identify conserved phylogenetic markers from whole-genome alignments.
    Sahl JW; Matalka MN; Rasko DA
    Appl Environ Microbiol; 2012 Jul; 78(14):4884-92. PubMed ID: 22582056
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparative genomics of European avian pathogenic E. Coli (APEC).
    Cordoni G; Woodward MJ; Wu H; Alanazi M; Wallis T; La Ragione RM
    BMC Genomics; 2016 Nov; 17(1):960. PubMed ID: 27875980
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genomic variation in Salmonella enterica core genes for epidemiological typing.
    Leekitcharoenphon P; Lukjancenko O; Friis C; Aarestrup FM; Ussery DW
    BMC Genomics; 2012 Mar; 13():88. PubMed ID: 22409488
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing.
    Yassine I; Lefèvre S; Hansen EE; Ruckly C; Carle I; Lejay-Collin M; Fabre L; Rafei R; Clermont D; de la Gandara MP; Dabboussi F; Thomson NR; Weill FX
    Nat Commun; 2022 Jan; 13(1):551. PubMed ID: 35087053
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of 61 sequenced Escherichia coli genomes.
    Lukjancenko O; Wassenaar TM; Ussery DW
    Microb Ecol; 2010 Nov; 60(4):708-20. PubMed ID: 20623278
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparative genomic analysis of 127 Escherichia coli strains isolated from domestic animals with diarrhea in China.
    Tang F; Wang J; Li D; Gao S; Ren J; Ma L; Liu F; Zhuge X; Yan G; Lu Y; Dai J
    BMC Genomics; 2019 Mar; 20(1):212. PubMed ID: 30866824
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups.
    Abram K; Udaondo Z; Bleker C; Wanchai V; Wassenaar TM; Robeson MS; Ussery DW
    Commun Biol; 2021 Jan; 4(1):117. PubMed ID: 33500552
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions.
    Laing C; Buchanan C; Taboada EN; Zhang Y; Kropinski A; Villegas A; Thomas JE; Gannon VP
    BMC Bioinformatics; 2010 Sep; 11():461. PubMed ID: 20843356
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Identification of Escherichia coli and Shigella Species from Whole-Genome Sequences.
    Chattaway MA; Schaefer U; Tewolde R; Dallman TJ; Jenkins C
    J Clin Microbiol; 2017 Feb; 55(2):616-623. PubMed ID: 27974538
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Are
    Robins-Browne RM; Holt KE; Ingle DJ; Hocking DM; Yang J; Tauschek M
    Front Cell Infect Microbiol; 2016; 6():141. PubMed ID: 27917373
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Virulence Gene Profiles and Clonal Relationships of Escherichia coli O26:H11 Isolates from Feedlot Cattle as Determined by Whole-Genome Sequencing.
    Gonzalez-Escalona N; Toro M; Rump LV; Cao G; Nagaraja TG; Meng J
    Appl Environ Microbiol; 2016 Jul; 82(13):3900-3912. PubMed ID: 27107118
    [TBL] [Abstract][Full Text] [Related]  

  • 14. When whole-genome alignments just won't work: kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes.
    Gardner SN; Hall BG
    PLoS One; 2013; 8(12):e81760. PubMed ID: 24349125
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Phylogeny and strain typing of Escherichia coli, inferred from variation at mononucleotide repeat loci.
    Diamant E; Palti Y; Gur-Arie R; Cohen H; Hallerman EM; Kashi Y
    Appl Environ Microbiol; 2004 Apr; 70(4):2464-73. PubMed ID: 15066845
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Rapid and Simple Universal
    Caméléna F; Birgy A; Smail Y; Courroux C; Mariani-Kurkdjian P; Le Hello S; Bonacorsi S; Bidet P
    Appl Environ Microbiol; 2019 Mar; 85(6):. PubMed ID: 30610078
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia.
    Williamson CH; Sahl JW; Smith TJ; Xie G; Foley BT; Smith LA; Fernández RA; Lindström M; Korkeala H; Keim P; Foster J; Hill K
    BMC Genomics; 2016 Mar; 17():180. PubMed ID: 26939550
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Extensive genomic diversity in pathogenic Escherichia coli and Shigella Strains revealed by comparative genomic hybridization microarray.
    Fukiya S; Mizoguchi H; Tobe T; Mori H
    J Bacteriol; 2004 Jun; 186(12):3911-21. PubMed ID: 15175305
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray.
    Willenbrock H; Hallin PF; Wassenaar TM; Ussery DW
    Genome Biol; 2007; 8(12):R267. PubMed ID: 18088402
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Whole genome sequencing reveals high clonal diversity of
    Sonda T; Kumburu H; van Zwetselaar M; Alifrangis M; Mmbaga BT; Aarestrup FM; Kibiki G; Lund O
    Antimicrob Resist Infect Control; 2018; 7():72. PubMed ID: 29977533
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.