305 related articles for article (PubMed ID: 23133356)
1. The role of flexibility and conformational selection in the binding promiscuity of PDZ domains.
Münz M; Hein J; Biggin PC
PLoS Comput Biol; 2012; 8(11):e1002749. PubMed ID: 23133356
[TBL] [Abstract][Full Text] [Related]
2. Conformational flexibility of GRASPs and their constituent PDZ subdomains reveals structural basis of their promiscuous interactome.
Mendes LFS; Batista MRB; Judge PJ; Watts A; Redfield C; Costa-Filho AJ
FEBS J; 2020 Aug; 287(15):3255-3272. PubMed ID: 31920006
[TBL] [Abstract][Full Text] [Related]
3. Thermodynamic basis for promiscuity and selectivity in protein-protein interactions: PDZ domains, a case study.
Basdevant N; Weinstein H; Ceruso M
J Am Chem Soc; 2006 Oct; 128(39):12766-77. PubMed ID: 17002371
[TBL] [Abstract][Full Text] [Related]
4. Ligand-induced dynamic changes in extended PDZ domains from NHERF1.
Bhattacharya S; Ju JH; Orlova N; Khajeh JA; Cowburn D; Bu Z
J Mol Biol; 2013 Jul; 425(14):2509-28. PubMed ID: 23583913
[TBL] [Abstract][Full Text] [Related]
5. An allosteric intramolecular PDZ-PDZ interaction modulates PTP-BL PDZ2 binding specificity.
van den Berk LC; Landi E; Walma T; Vuister GW; Dente L; Hendriks WJ
Biochemistry; 2007 Nov; 46(47):13629-37. PubMed ID: 17979300
[TBL] [Abstract][Full Text] [Related]
6. Peptide binding properties of the three PDZ domains of Bazooka (Drosophila Par-3).
Yu CG; Tonikian R; Felsensteiner C; Jhingree JR; Desveaux D; Sidhu SS; Harris TJ
PLoS One; 2014; 9(1):e86412. PubMed ID: 24466078
[TBL] [Abstract][Full Text] [Related]
7. Structure, dynamics and binding characteristics of the second PDZ domain of PTP-BL.
Walma T; Spronk CA; Tessari M; Aelen J; Schepens J; Hendriks W; Vuister GW
J Mol Biol; 2002 Mar; 316(5):1101-10. PubMed ID: 11884147
[TBL] [Abstract][Full Text] [Related]
8. Structure function relations in PDZ-domain-containing proteins: Implications for protein networks in cellular signalling.
Manjunath GP; Ramanujam PL; Galande S
J Biosci; 2018 Mar; 43(1):155-171. PubMed ID: 29485124
[TBL] [Abstract][Full Text] [Related]
9. Different conformational dynamics of PDZ1 and PDZ2 in full-length EBP50 analyzed by hydrogen/deuterium exchange mass spectrometry.
Park JY; Duc NM; Kim DK; Lee SY; Li S; Seo MD; Woods VL; Chung KY
Biochem Cell Biol; 2015 Aug; 93(4):290-7. PubMed ID: 25789870
[TBL] [Abstract][Full Text] [Related]
10. Crystallographic and nuclear magnetic resonance evaluation of the impact of peptide binding to the second PDZ domain of protein tyrosine phosphatase 1E.
Zhang J; Sapienza PJ; Ke H; Chang A; Hengel SR; Wang H; Phillips GN; Lee AL
Biochemistry; 2010 Nov; 49(43):9280-91. PubMed ID: 20839809
[TBL] [Abstract][Full Text] [Related]
11. Dishevelled2 activates WGEF via its interaction with a unique internal peptide motif of the GEF.
Omble A; Mahajan S; Bhoite A; Kulkarni K
Commun Biol; 2024 May; 7(1):543. PubMed ID: 38714795
[TBL] [Abstract][Full Text] [Related]
12. An in silico analysis of the binding modes and binding affinities of small molecule modulators of PDZ-peptide interactions.
Tiwari G; Mohanty D
PLoS One; 2013; 8(8):e71340. PubMed ID: 23951139
[TBL] [Abstract][Full Text] [Related]
13. Structural insight into GRIP1-PDZ6 in Alzheimer's disease: study from protein expression data to molecular dynamics simulations.
Chatterjee P; Roy D
J Biomol Struct Dyn; 2017 Aug; 35(10):2235-2247. PubMed ID: 27425598
[TBL] [Abstract][Full Text] [Related]
14. Comparative structural analysis of the Erbin PDZ domain and the first PDZ domain of ZO-1. Insights into determinants of PDZ domain specificity.
Appleton BA; Zhang Y; Wu P; Yin JP; Hunziker W; Skelton NJ; Sidhu SS; Wiesmann C
J Biol Chem; 2006 Aug; 281(31):22312-22320. PubMed ID: 16737969
[TBL] [Abstract][Full Text] [Related]
15. Structural basis for NHERF1 PDZ domain binding.
Mamonova T; Kurnikova M; Friedman PA
Biochemistry; 2012 Apr; 51(14):3110-20. PubMed ID: 22429102
[TBL] [Abstract][Full Text] [Related]
16. Creating conformational entropy by increasing interdomain mobility in ligand binding regulation: a revisit to N-terminal tandem PDZ domains of PSD-95.
Wang W; Weng J; Zhang X; Liu M; Zhang M
J Am Chem Soc; 2009 Jan; 131(2):787-96. PubMed ID: 19072119
[TBL] [Abstract][Full Text] [Related]
17. Ensemble-Based Analysis of the Dynamic Allostery in the PSD-95 PDZ3 Domain in Relation to the General Variability of PDZ Structures.
Dudola D; Hinsenkamp A; Gáspári Z
Int J Mol Sci; 2020 Nov; 21(21):. PubMed ID: 33172212
[TBL] [Abstract][Full Text] [Related]
18. Structure-based identification of CaMKIIα-interacting MUPP1 PDZ domains and rational design of peptide ligands to target such interaction in human fertilization.
Zhang YL; Han ZF; Sun YP
Amino Acids; 2016 Jun; 48(6):1509-21. PubMed ID: 26984442
[TBL] [Abstract][Full Text] [Related]
19. Peptide binding to the PDZ3 domain by conformational selection.
Steiner S; Caflisch A
Proteins; 2012 Nov; 80(11):2562-72. PubMed ID: 22753014
[TBL] [Abstract][Full Text] [Related]
20. Cluster based prediction of PDZ-peptide interactions.
Kundu K; Backofen R
BMC Genomics; 2014; 15 Suppl 1(Suppl 1):S5. PubMed ID: 24564547
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
