These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

281 related articles for article (PubMed ID: 23140471)

  • 21. Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13.
    Hou J; Wu T; Cao R; Cheng J
    Proteins; 2019 Dec; 87(12):1165-1178. PubMed ID: 30985027
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Optimal contact definition for reconstruction of contact maps.
    Duarte JM; Sathyapriya R; Stehr H; Filippis I; Lappe M
    BMC Bioinformatics; 2010 May; 11():283. PubMed ID: 20507547
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Better prediction of protein contact number using a support vector regression analysis of amino acid sequence.
    Yuan Z
    BMC Bioinformatics; 2005 Oct; 6():248. PubMed ID: 16221309
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Protein structure prediction using deep learning distance and hydrogen-bonding restraints in CASP14.
    Zheng W; Li Y; Zhang C; Zhou X; Pearce R; Bell EW; Huang X; Zhang Y
    Proteins; 2021 Dec; 89(12):1734-1751. PubMed ID: 34331351
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Evaluation of residue-residue contact prediction in CASP10.
    Monastyrskyy B; D'Andrea D; Fidelis K; Tramontano A; Kryshtafovych A
    Proteins; 2014 Feb; 82 Suppl 2(0 2):138-53. PubMed ID: 23760879
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Protein fold recognition by prediction-based threading.
    Rost B; Schneider R; Sander C
    J Mol Biol; 1997 Jul; 270(3):471-80. PubMed ID: 9237912
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Improving consensus contact prediction via server correlation reduction.
    Gao X; Bu D; Xu J; Li M
    BMC Struct Biol; 2009 May; 9():28. PubMed ID: 19419562
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Contact prediction for beta and alpha-beta proteins using integer linear optimization and its impact on the first principles 3D structure prediction method ASTRO-FOLD.
    Rajgaria R; Wei Y; Floudas CA
    Proteins; 2010 Jun; 78(8):1825-46. PubMed ID: 20225257
    [TBL] [Abstract][Full Text] [Related]  

  • 29. EigenTHREADER: analogous protein fold recognition by efficient contact map threading.
    Buchan DWA; Jones DT
    Bioinformatics; 2017 Sep; 33(17):2684-2690. PubMed ID: 28419258
    [TBL] [Abstract][Full Text] [Related]  

  • 30. A large-scale comparative assessment of methods for residue-residue contact prediction.
    Wuyun Q; Zheng W; Peng Z; Yang J
    Brief Bioinform; 2018 Mar; 19(2):219-230. PubMed ID: 27802931
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts.
    Zhu J; Zhang H; Li SC; Wang C; Kong L; Sun S; Zheng WM; Bu D
    Bioinformatics; 2017 Dec; 33(23):3749-3757. PubMed ID: 28961795
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Protein contacts, inter-residue interactions and side-chain modelling.
    Faure G; Bornot A; de Brevern AG
    Biochimie; 2008 Apr; 90(4):626-39. PubMed ID: 18086572
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A two-stage approach for improved prediction of residue contact maps.
    Vullo A; Walsh I; Pollastri G
    BMC Bioinformatics; 2006 Mar; 7():180. PubMed ID: 16573808
    [TBL] [Abstract][Full Text] [Related]  

  • 34. DeepCDpred: Inter-residue distance and contact prediction for improved prediction of protein structure.
    Ji S; Oruç T; Mead L; Rehman MF; Thomas CM; Butterworth S; Winn PJ
    PLoS One; 2019; 14(1):e0205214. PubMed ID: 30620738
    [TBL] [Abstract][Full Text] [Related]  

  • 35. De novo structure prediction of globular proteins aided by sequence variation-derived contacts.
    Kosciolek T; Jones DT
    PLoS One; 2014; 9(3):e92197. PubMed ID: 24637808
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks.
    Walsh I; Baù D; Martin AJ; Mooney C; Vullo A; Pollastri G
    BMC Struct Biol; 2009 Jan; 9():5. PubMed ID: 19183478
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Improved residue contact prediction using support vector machines and a large feature set.
    Cheng J; Baldi P
    BMC Bioinformatics; 2007 Apr; 8():113. PubMed ID: 17407573
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Evolutionary couplings detect side-chain interactions.
    Hockenberry AJ; Wilke CO
    PeerJ; 2019; 7():e7280. PubMed ID: 31328041
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Connectivity independent protein-structure alignment: a hierarchical approach.
    Kolbeck B; May P; Schmidt-Goenner T; Steinke T; Knapp EW
    BMC Bioinformatics; 2006 Nov; 7():510. PubMed ID: 17118190
    [TBL] [Abstract][Full Text] [Related]  

  • 40. COMSAT: Residue contact prediction of transmembrane proteins based on support vector machines and mixed integer linear programming.
    Zhang H; Huang Q; Bei Z; Wei Y; Floudas CA
    Proteins; 2016 Mar; 84(3):332-48. PubMed ID: 26756402
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 15.