These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
176 related articles for article (PubMed ID: 23160413)
1. Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR. Van Auken K; Fey P; Berardini TZ; Dodson R; Cooper L; Li D; Chan J; Li Y; Basu S; Muller HM; Chisholm R; Huala E; Sternberg PW; Database (Oxford); 2012; 2012():bas040. PubMed ID: 23160413 [TBL] [Abstract][Full Text] [Related]
2. Building an efficient curation workflow for the Arabidopsis literature corpus. Li D; Berardini TZ; Muller RJ; Huala E Database (Oxford); 2012; 2012():bas047. PubMed ID: 23221298 [TBL] [Abstract][Full Text] [Related]
3. Textpresso Central: a customizable platform for searching, text mining, viewing, and curating biomedical literature. Müller HM; Van Auken KM; Li Y; Sternberg PW BMC Bioinformatics; 2018 Mar; 19(1):94. PubMed ID: 29523070 [TBL] [Abstract][Full Text] [Related]
4. Biocuration workflows and text mining: overview of the BioCreative 2012 Workshop Track II. Lu Z; Hirschman L Database (Oxford); 2012; 2012():bas043. PubMed ID: 23160416 [TBL] [Abstract][Full Text] [Related]
5. Developing a biocuration workflow for AgBase, a non-model organism database. Pillai L; Chouvarine P; Tudor CO; Schmidt CJ; Vijay-Shanker K; McCarthy FM Database (Oxford); 2012; 2012():bas038. PubMed ID: 23160411 [TBL] [Abstract][Full Text] [Related]
6. dictyBase 2015: Expanding data and annotations in a new software environment. Basu S; Fey P; Jimenez-Morales D; Dodson RJ; Chisholm RL Genesis; 2015 Aug; 53(8):523-534. PubMed ID: 26088819 [TBL] [Abstract][Full Text] [Related]
7. One stop shop for everything Dictyostelium: dictyBase and the Dicty Stock Center in 2012. Fey P; Dodson RJ; Basu S; Chisholm RL Methods Mol Biol; 2013; 983():59-92. PubMed ID: 23494302 [TBL] [Abstract][Full Text] [Related]
8. dictyBase, the model organism database for Dictyostelium discoideum. Chisholm RL; Gaudet P; Just EM; Pilcher KE; Fey P; Merchant SN; Kibbe WA Nucleic Acids Res; 2006 Jan; 34(Database issue):D423-7. PubMed ID: 16381903 [TBL] [Abstract][Full Text] [Related]
9. Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes. Grove C; Cain S; Chen WJ; Davis P; Harris T; Howe KL; Kishore R; Lee R; Paulini M; Raciti D; Tuli MA; Van Auken K; Williams G; Methods Mol Biol; 2018; 1757():399-470. PubMed ID: 29761466 [TBL] [Abstract][Full Text] [Related]
10. Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase. Arnaboldi V; Raciti D; Van Auken K; Chan JN; Müller HM; Sternberg PW Database (Oxford); 2020 Jan; 2020():. PubMed ID: 32185395 [TBL] [Abstract][Full Text] [Related]
11. Opportunities for text mining in the FlyBase genetic literature curation workflow. McQuilton P; Database (Oxford); 2012; 2012():bas039. PubMed ID: 23160412 [TBL] [Abstract][Full Text] [Related]
12. Textpresso: an ontology-based information retrieval and extraction system for biological literature. Müller HM; Kenny EE; Sternberg PW PLoS Biol; 2004 Nov; 2(11):e309. PubMed ID: 15383839 [TBL] [Abstract][Full Text] [Related]
13. The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools. Lamesch P; Berardini TZ; Li D; Swarbreck D; Wilks C; Sasidharan R; Muller R; Dreher K; Alexander DL; Garcia-Hernandez M; Karthikeyan AS; Lee CH; Nelson WD; Ploetz L; Singh S; Wensel A; Huala E Nucleic Acids Res; 2012 Jan; 40(Database issue):D1202-10. PubMed ID: 22140109 [TBL] [Abstract][Full Text] [Related]
14. Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) Cellular Component curation. Van Auken K; Jaffery J; Chan J; Müller HM; Sternberg PW BMC Bioinformatics; 2009 Jul; 10():228. PubMed ID: 19622167 [TBL] [Abstract][Full Text] [Related]
15. WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans. Davis P; Zarowiecki M; Arnaboldi V; Becerra A; Cain S; Chan J; Chen WJ; Cho J; da Veiga Beltrame E; Diamantakis S; Gao S; Grigoriadis D; Grove CA; Harris TW; Kishore R; Le T; Lee RYN; Luypaert M; Müller HM; Nakamura C; Nuin P; Paulini M; Quinton-Tulloch M; Raciti D; Rodgers FH; Russell M; Schindelman G; Singh A; Stickland T; Van Auken K; Wang Q; Williams G; Wright AJ; Yook K; Berriman M; Howe KL; Schedl T; Stein L; Sternberg PW Genetics; 2022 Apr; 220(4):. PubMed ID: 35134929 [TBL] [Abstract][Full Text] [Related]
16. Methods and strategies for gene structure curation in WormBase. Williams GW; Davis PA; Rogers AS; Bieri T; Ozersky P; Spieth J Database (Oxford); 2011; 2011():baq039. PubMed ID: 21543339 [TBL] [Abstract][Full Text] [Related]
17. Using the Arabidopsis Information Resource (TAIR) to Find Information About Arabidopsis Genes. Reiser L; Subramaniam S; Li D; Huala E Curr Protoc Bioinformatics; 2017 Dec; 60():1.11.1-1.11.45. PubMed ID: 29220077 [TBL] [Abstract][Full Text] [Related]
18. WormBase 2017: molting into a new stage. Lee RYN; Howe KL; Harris TW; Arnaboldi V; Cain S; Chan J; Chen WJ; Davis P; Gao S; Grove C; Kishore R; Muller HM; Nakamura C; Nuin P; Paulini M; Raciti D; Rodgers F; Russell M; Schindelman G; Tuli MA; Van Auken K; Wang Q; Williams G; Wright A; Yook K; Berriman M; Kersey P; Schedl T; Stein L; Sternberg PW Nucleic Acids Res; 2018 Jan; 46(D1):D869-D874. PubMed ID: 29069413 [TBL] [Abstract][Full Text] [Related]
19. Collaborative biocuration--text-mining development task for document prioritization for curation. Wiegers TC; Davis AP; Mattingly CJ Database (Oxford); 2012; 2012():bas037. PubMed ID: 23180769 [TBL] [Abstract][Full Text] [Related]
20. Overview of the gene ontology task at BioCreative IV. Mao Y; Van Auken K; Li D; Arighi CN; McQuilton P; Hayman GT; Tweedie S; Schaeffer ML; Laulederkind SJ; Wang SJ; Gobeill J; Ruch P; Luu AT; Kim JJ; Chiang JH; Chen YD; Yang CJ; Liu H; Zhu D; Li Y; Yu H; Emadzadeh E; Gonzalez G; Chen JM; Dai HJ; Lu Z Database (Oxford); 2014; 2014():. PubMed ID: 25157073 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]