124 related articles for article (PubMed ID: 2319595)
1. Use of techniques derived from graph theory to compare secondary structure motifs in proteins.
Mitchell EM; Artymiuk PJ; Rice DW; Willett P
J Mol Biol; 1990 Mar; 212(1):151-66. PubMed ID: 2319595
[TBL] [Abstract][Full Text] [Related]
2. Identification of tertiary structure resemblance in proteins using a maximal common subgraph isomorphism algorithm.
Grindley HM; Artymiuk PJ; Rice DW; Willett P
J Mol Biol; 1993 Feb; 229(3):707-21. PubMed ID: 8381875
[TBL] [Abstract][Full Text] [Related]
3. Searching for pharmacophoric patterns in databases of three-dimensional chemical structures.
Willett P
J Mol Recognit; 1995; 8(5):290-303. PubMed ID: 8619950
[TBL] [Abstract][Full Text] [Related]
4. A graph-theoretic approach to the identification of three-dimensional patterns of amino acid side-chains in protein structures.
Artymiuk PJ; Poirrette AR; Grindley HM; Rice DW; Willett P
J Mol Biol; 1994 Oct; 243(2):327-44. PubMed ID: 7932758
[TBL] [Abstract][Full Text] [Related]
5. Searching for patterns of amino acids in 3D protein structures.
Spriggs RV; Artymiuk PJ; Willett P
J Chem Inf Comput Sci; 2003; 43(2):412-21. PubMed ID: 12653503
[TBL] [Abstract][Full Text] [Related]
6. Analysis of protein sheet topologies by graph theoretical methods.
Koch I; Kaden F; Selbig J
Proteins; 1992 Apr; 12(4):314-23. PubMed ID: 1579565
[TBL] [Abstract][Full Text] [Related]
7. An automatic search for similar spatial arrangements of alpha-helices and beta-strands in globular proteins.
Abagyan RA; Maiorov VN
J Biomol Struct Dyn; 1989 Jun; 6(6):1045-60. PubMed ID: 2818856
[TBL] [Abstract][Full Text] [Related]
8. Identification of structural motifs from protein coordinate data: secondary structure and first-level supersecondary structure.
Richards FM; Kundrot CE
Proteins; 1988; 3(2):71-84. PubMed ID: 3399495
[TBL] [Abstract][Full Text] [Related]
9. Representation and searching of carbohydrate structures using graph-theoretic techniques.
Bruno IJ; Kemp NM; Artymiuk PJ; Willett P
Carbohydr Res; 1997 Oct; 304(1):61-7. PubMed ID: 9403995
[TBL] [Abstract][Full Text] [Related]
10. Comparing graph representations of protein structure for mining family-specific residue-based packing motifs.
Huan J; Bandyopadhyay D; Wang W; Snoeyink J; Prins J; Tropsha A
J Comput Biol; 2005; 12(6):657-71. PubMed ID: 16108709
[TBL] [Abstract][Full Text] [Related]
11. A (sub)graph isomorphism algorithm for matching large graphs.
Cordella LP; Foggia P; Sansone C; Vento M
IEEE Trans Pattern Anal Mach Intell; 2004 Oct; 26(10):1367-72. PubMed ID: 15641723
[TBL] [Abstract][Full Text] [Related]
12. An efficient randomized algorithm for contact-based NMR backbone resonance assignment.
Kamisetty H; Bailey-Kellogg C; Pandurangan G
Bioinformatics; 2006 Jan; 22(2):172-80. PubMed ID: 16287932
[TBL] [Abstract][Full Text] [Related]
13. Scaffold hopping using clique detection applied to reduced graphs.
Barker EJ; Buttar D; Cosgrove DA; Gardiner EJ; Kitts P; Willett P; Gillet VJ
J Chem Inf Model; 2006; 46(2):503-11. PubMed ID: 16562978
[TBL] [Abstract][Full Text] [Related]
14. Fitting a geometric graph to a protein-protein interaction network.
Higham DJ; Rasajski M; Przulj N
Bioinformatics; 2008 Apr; 24(8):1093-9. PubMed ID: 18344248
[TBL] [Abstract][Full Text] [Related]
15. BSAlign: a rapid graph-based algorithm for detecting ligand-binding sites in protein structures.
Aung Z; Tong JC
Genome Inform; 2008; 21():65-76. PubMed ID: 19425148
[TBL] [Abstract][Full Text] [Related]
16. Self-description for construction and computation on graph-rewriting automata.
Tomita K; Murata S; Kurokawa H
Artif Life; 2007; 13(4):383-96. PubMed ID: 17716018
[TBL] [Abstract][Full Text] [Related]
17. Fast structure alignment for protein databank searching.
Orengo CA; Brown NP; Taylor WR
Proteins; 1992 Oct; 14(2):139-67. PubMed ID: 1409565
[TBL] [Abstract][Full Text] [Related]
18. Fast construction of assembly trees for molecular graphs.
Artemova S; Grudinin S; Redon S
J Comput Chem; 2011 Jun; 32(8):1589-98. PubMed ID: 21328401
[TBL] [Abstract][Full Text] [Related]
19. Protein function prediction via graph kernels.
Borgwardt KM; Ong CS; Schönauer S; Vishwanathan SV; Smola AJ; Kriegel HP
Bioinformatics; 2005 Jun; 21 Suppl 1():i47-56. PubMed ID: 15961493
[TBL] [Abstract][Full Text] [Related]
20. Continuous and discontinuous domains: an algorithm for the automatic generation of reliable protein domain definitions.
Siddiqui AS; Barton GJ
Protein Sci; 1995 May; 4(5):872-84. PubMed ID: 7663343
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
