192 related articles for article (PubMed ID: 23203872)
41. diArk--the database for eukaryotic genome and transcriptome assemblies in 2014.
Kollmar M; Kollmar L; Hammesfahr B; Simm D
Nucleic Acids Res; 2015 Jan; 43(Database issue):D1107-12. PubMed ID: 25378341
[TBL] [Abstract][Full Text] [Related]
42. Bovine Genome Database: new annotation tools for a new reference genome.
Shamimuzzaman M; Le Tourneau JJ; Unni DR; Diesh CM; Triant DA; Walsh AT; Tayal A; Conant GC; Hagen DE; Elsik CG
Nucleic Acids Res; 2020 Jan; 48(D1):D676-D681. PubMed ID: 31647100
[TBL] [Abstract][Full Text] [Related]
43. Improved methods and resources for paramecium genomics: transcription units, gene annotation and gene expression.
Arnaiz O; Van Dijk E; Bétermier M; Lhuillier-Akakpo M; de Vanssay A; Duharcourt S; Sallet E; Gouzy J; Sperling L
BMC Genomics; 2017 Jun; 18(1):483. PubMed ID: 28651633
[TBL] [Abstract][Full Text] [Related]
44. The UCSC Genome Browser database: update 2010.
Rhead B; Karolchik D; Kuhn RM; Hinrichs AS; Zweig AS; Fujita PA; Diekhans M; Smith KE; Rosenbloom KR; Raney BJ; Pohl A; Pheasant M; Meyer LR; Learned K; Hsu F; Hillman-Jackson J; Harte RA; Giardine B; Dreszer TR; Clawson H; Barber GP; Haussler D; Kent WJ
Nucleic Acids Res; 2010 Jan; 38(Database issue):D613-9. PubMed ID: 19906737
[TBL] [Abstract][Full Text] [Related]
45. Characterizing and annotating the genome using RNA-seq data.
Chen G; Shi T; Shi L
Sci China Life Sci; 2017 Feb; 60(2):116-125. PubMed ID: 27294835
[TBL] [Abstract][Full Text] [Related]
46. Computational discovery of human coding and non-coding transcripts with conserved splice sites.
Rose D; Hiller M; Schutt K; Hackermüller J; Backofen R; Stadler PF
Bioinformatics; 2011 Jul; 27(14):1894-900. PubMed ID: 21622663
[TBL] [Abstract][Full Text] [Related]
47. The UCSC genome browser database: update 2007.
Kuhn RM; Karolchik D; Zweig AS; Trumbower H; Thomas DJ; Thakkapallayil A; Sugnet CW; Stanke M; Smith KE; Siepel A; Rosenbloom KR; Rhead B; Raney BJ; Pohl A; Pedersen JS; Hsu F; Hinrichs AS; Harte RA; Diekhans M; Clawson H; Bejerano G; Barber GP; Baertsch R; Haussler D; Kent WJ
Nucleic Acids Res; 2007 Jan; 35(Database issue):D668-73. PubMed ID: 17142222
[TBL] [Abstract][Full Text] [Related]
48. ExUTR: a novel pipeline for large-scale prediction of 3'-UTR sequences from NGS data.
Huang Z; Teeling EC
BMC Genomics; 2017 Nov; 18(1):847. PubMed ID: 29110697
[TBL] [Abstract][Full Text] [Related]
49. Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human.
Zhang Z; Pang AW; Gerstein M
BMC Evol Biol; 2007 Feb; 7 Suppl 1(Suppl 1):S14. PubMed ID: 17288572
[TBL] [Abstract][Full Text] [Related]
50. SPAR: small RNA-seq portal for analysis of sequencing experiments.
Kuksa PP; Amlie-Wolf A; Katanic Ž; Valladares O; Wang LS; Leung YY
Nucleic Acids Res; 2018 Jul; 46(W1):W36-W42. PubMed ID: 29733404
[TBL] [Abstract][Full Text] [Related]
51. Quantitative RNA-Seq analysis in non-model species: assessing transcriptome assemblies as a scaffold and the utility of evolutionary divergent genomic reference species.
Hornett EA; Wheat CW
BMC Genomics; 2012 Aug; 13():361. PubMed ID: 22853326
[TBL] [Abstract][Full Text] [Related]
52. Update of the FANTOM web resource: expansion to provide additional transcriptome atlases.
Lizio M; Abugessaisa I; Noguchi S; Kondo A; Hasegawa A; Hon CC; de Hoon M; Severin J; Oki S; Hayashizaki Y; Carninci P; Kasukawa T; Kawaji H
Nucleic Acids Res; 2019 Jan; 47(D1):D752-D758. PubMed ID: 30407557
[TBL] [Abstract][Full Text] [Related]
53. Inversion variants in human and primate genomes.
Catacchio CR; Maggiolini FAM; D'Addabbo P; Bitonto M; Capozzi O; Lepore Signorile M; Miroballo M; Archidiacono N; Eichler EE; Ventura M; Antonacci F
Genome Res; 2018 Jun; 28(6):910-920. PubMed ID: 29776991
[TBL] [Abstract][Full Text] [Related]
54. Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammals.
Taylor JF; Whitacre LK; Hoff JL; Tizioto PC; Kim J; Decker JE; Schnabel RD
Genet Sel Evol; 2016 Aug; 48(1):59. PubMed ID: 27534529
[TBL] [Abstract][Full Text] [Related]
55. Exploiting orthology and de novo transcriptome assembly to refine target sequence information.
Söllner JF; Leparc G; Zwick M; Schönberger T; Hildebrandt T; Nieselt K; Simon E
BMC Med Genomics; 2019 May; 12(1):69. PubMed ID: 31122257
[TBL] [Abstract][Full Text] [Related]
56. Reference genome and transcriptome informed by the sex chromosome complement of the sample increase ability to detect sex differences in gene expression from RNA-Seq data.
Olney KC; Brotman SM; Andrews JP; Valverde-Vesling VA; Wilson MA
Biol Sex Differ; 2020 Jul; 11(1):42. PubMed ID: 32693839
[TBL] [Abstract][Full Text] [Related]
57. Transcriptome sequences spanning key developmental states as a resource for the study of the cestode Schistocephalus solidus, a threespine stickleback parasite.
Hébert FO; Grambauer S; Barber I; Landry CR; Aubin-Horth N
Gigascience; 2016 Jun; 5():24. PubMed ID: 27259971
[TBL] [Abstract][Full Text] [Related]
58. Multi-omics annotation of human long non-coding RNAs.
Li Q; Li Z; Feng C; Jiang S; Zhang Z; Ma L
Biochem Soc Trans; 2020 Aug; 48(4):1545-1556. PubMed ID: 32756901
[TBL] [Abstract][Full Text] [Related]
59. An RNA-Seq atlas of gene expression in mouse and rat normal tissues.
Söllner JF; Leparc G; Hildebrandt T; Klein H; Thomas L; Stupka E; Simon E
Sci Data; 2017 Dec; 4():170185. PubMed ID: 29231921
[TBL] [Abstract][Full Text] [Related]
60. Illuminating the dark side of the human transcriptome with long read transcript sequencing.
Kuo RI; Cheng Y; Zhang R; Brown JWS; Smith J; Archibald AL; Burt DW
BMC Genomics; 2020 Oct; 21(1):751. PubMed ID: 33126848
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
