These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

192 related articles for article (PubMed ID: 23208147)

  • 1. [Identification and analysis methods of plant LTR retrotransposon sequences].
    Hou XG; Zhang X; Guo DL
    Yi Chuan; 2012 Nov; 34(11):1491-500. PubMed ID: 23208147
    [TBL] [Abstract][Full Text] [Related]  

  • 2. De novo identification of LTR retrotransposons in eukaryotic genomes.
    Rho M; Choi JH; Kim S; Lynch M; Tang H
    BMC Genomics; 2007 Apr; 8():90. PubMed ID: 17407597
    [TBL] [Abstract][Full Text] [Related]  

  • 3. LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons.
    Xu Z; Wang H
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W265-8. PubMed ID: 17485477
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Fine-grained annotation and classification of de novo predicted LTR retrotransposons.
    Steinbiss S; Willhoeft U; Gremme G; Kurtz S
    Nucleic Acids Res; 2009 Nov; 37(21):7002-13. PubMed ID: 19786494
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DARTS: An Algorithm for Domain-Associated Retrotransposon Search in Genome Assemblies.
    Biryukov M; Ustyantsev K
    Genes (Basel); 2021 Dec; 13(1):. PubMed ID: 35052350
    [TBL] [Abstract][Full Text] [Related]  

  • 6. LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons.
    Ellinghaus D; Kurtz S; Willhoeft U
    BMC Bioinformatics; 2008 Jan; 9():18. PubMed ID: 18194517
    [TBL] [Abstract][Full Text] [Related]  

  • 7. LTR_STRUC: a novel search and identification program for LTR retrotransposons.
    McCarthy EM; McDonald JF
    Bioinformatics; 2003 Feb; 19(3):362-7. PubMed ID: 12584121
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Large-scale transcriptome data reveals transcriptional activity of fission yeast LTR retrotransposons.
    Mourier T; Willerslev E
    BMC Genomics; 2010 Mar; 11():167. PubMed ID: 20226011
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparative analysis of miniature inverted-repeat transposable elements (MITEs) and long terminal repeat (LTR) retrotransposons in six Citrus species.
    Liu Y; Tahir Ul Qamar M; Feng JW; Ding Y; Wang S; Wu G; Ke L; Xu Q; Chen LL
    BMC Plant Biol; 2019 Apr; 19(1):140. PubMed ID: 30987586
    [TBL] [Abstract][Full Text] [Related]  

  • 10. [Plant active LTR retrotransposons: a review].
    Liang L; Zhou M
    Sheng Wu Gong Cheng Xue Bao; 2016 Apr; 32(4):409-429. PubMed ID: 28853263
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Efficient algorithms and software for detection of full-length LTR retrotransposons.
    Kalyanaraman A; Aluru S
    Proc IEEE Comput Syst Bioinform Conf; 2005; ():56-64. PubMed ID: 16447962
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification of LTR retrotransposons in eukaryotic genomes: supports from structure and evolution.
    Wang H; Xu Z
    Int J Bioinform Res Appl; 2009; 5(4):365-77. PubMed ID: 19640825
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences.
    Gao L; McCarthy EM; Ganko EW; McDonald JF
    BMC Genomics; 2004 Mar; 5(1):18. PubMed ID: 15040813
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Efficient algorithms and software for detection of full-length LTR retrotransposons.
    Kalyanaraman A; Aluru S
    J Bioinform Comput Biol; 2006 Apr; 4(2):197-216. PubMed ID: 16819780
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Long terminal repeat retrotransposons of Oryza sativa.
    McCarthy EM; Liu J; Lizhi G; McDonald JF
    Genome Biol; 2002 Sep; 3(10):RESEARCH0053. PubMed ID: 12372141
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Bioinformatics Analysis Guides to LTR Retrotransposon-Derived Extrachromosomal Linear DNAs Identified by ALE-seq.
    Wang L; Cho J; Satheesh V
    Methods Mol Biol; 2021; 2250():111-114. PubMed ID: 33900597
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Sensitive detection of pre-integration intermediates of long terminal repeat retrotransposons in crop plants.
    Cho J; Benoit M; Catoni M; Drost HG; Brestovitsky A; Oosterbeek M; Paszkowski J
    Nat Plants; 2019 Jan; 5(1):26-33. PubMed ID: 30531940
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Novel clades of chromodomain-containing Gypsy LTR retrotransposons from mosses (Bryophyta).
    Novikova O; Mayorov V; Smyshlyaev G; Fursov M; Adkison L; Pisarenko O; Blinov A
    Plant J; 2008 Nov; 56(4):562-74. PubMed ID: 18643967
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of retrotransposon activity in plants.
    Defraia C; Slotkin RK
    Methods Mol Biol; 2014; 1112():195-210. PubMed ID: 24478016
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies.
    Pearce SR; Stuart-Rogers C; Knox MR; Kumar A; Ellis TH; Flavell AJ
    Plant J; 1999 Sep; 19(6):711-7. PubMed ID: 10571856
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.