149 related articles for article (PubMed ID: 23221088)
1. A fast ranking algorithm for predicting gene functions in biomolecular networks.
Re M; Mesiti M; Valentini G
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(6):1812-8. PubMed ID: 23221088
[TBL] [Abstract][Full Text] [Related]
2. Network-based ranking methods for prediction of novel disease associated microRNAs.
Le DH
Comput Biol Chem; 2015 Oct; 58():139-48. PubMed ID: 26231308
[TBL] [Abstract][Full Text] [Related]
3. Gene gravity-like algorithm for disease gene prediction based on phenotype-specific network.
Lin L; Yang T; Fang L; Yang J; Yang F; Zhao J
BMC Syst Biol; 2017 Dec; 11(1):121. PubMed ID: 29212543
[TBL] [Abstract][Full Text] [Related]
4. Network-based drug ranking and repositioning with respect to DrugBank therapeutic categories.
Re M; Valentini G
IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(6):1359-71. PubMed ID: 24407295
[TBL] [Abstract][Full Text] [Related]
5. Netter: re-ranking gene network inference predictions using structural network properties.
Ruyssinck J; Demeester P; Dhaene T; Saeys Y
BMC Bioinformatics; 2016 Feb; 17():76. PubMed ID: 26862054
[TBL] [Abstract][Full Text] [Related]
6. Cancer module genes ranking using kernelized score functions.
Re M; Valentini G
BMC Bioinformatics; 2012; 13 Suppl 14(Suppl 14):S3. PubMed ID: 23095178
[TBL] [Abstract][Full Text] [Related]
7. Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model.
Ni J; Koyuturk M; Tong H; Haines J; Xu R; Zhang X
BMC Bioinformatics; 2016 Nov; 17(1):453. PubMed ID: 27829360
[TBL] [Abstract][Full Text] [Related]
8. Exploiting ontology graph for predicting sparsely annotated gene function.
Wang S; Cho H; Zhai C; Berger B; Peng J
Bioinformatics; 2015 Jun; 31(12):i357-64. PubMed ID: 26072504
[TBL] [Abstract][Full Text] [Related]
9. An novel frequent probability pattern mining algorithm based on circuit simulation method in uncertain biological networks.
He J; Wang C; Qiu K; Zhong W
BMC Syst Biol; 2014; 8 Suppl 3(Suppl 3):S6. PubMed ID: 25350277
[TBL] [Abstract][Full Text] [Related]
10. Network legos: building blocks of cellular wiring diagrams.
Murali TM; Rivera CG
J Comput Biol; 2008 Sep; 15(7):829-44. PubMed ID: 18707557
[TBL] [Abstract][Full Text] [Related]
11. A Sparse Reconstruction Approach for Identifying Gene Regulatory Networks Using Steady-State Experiment Data.
Zhang W; Zhou T
PLoS One; 2015; 10(7):e0130979. PubMed ID: 26207991
[TBL] [Abstract][Full Text] [Related]
12. A GPU-based algorithm for fast node label learning in large and unbalanced biomolecular networks.
Frasca M; Grossi G; Gliozzo J; Mesiti M; Notaro M; Perlasca P; Petrini A; Valentini G
BMC Bioinformatics; 2018 Oct; 19(Suppl 10):353. PubMed ID: 30367594
[TBL] [Abstract][Full Text] [Related]
13. Gene expression complex networks: synthesis, identification, and analysis.
Lopes FM; Cesar RM; Costa Lda F
J Comput Biol; 2011 Oct; 18(10):1353-67. PubMed ID: 21548810
[TBL] [Abstract][Full Text] [Related]
14. Improved biological network reconstruction using graph Laplacian regularization.
Freschi V
J Comput Biol; 2011 Aug; 18(8):987-96. PubMed ID: 21702693
[TBL] [Abstract][Full Text] [Related]
15. Ranking differential hubs in gene co-expression networks.
Odibat O; Reddy CK
J Bioinform Comput Biol; 2012 Feb; 10(1):1240002. PubMed ID: 22809303
[TBL] [Abstract][Full Text] [Related]
16. Using Sub-Network Combinations to Scale Up an Enumeration Method for Determining the Network Structures of Biological Functions.
Xi JY; Ouyang Q
PLoS One; 2016; 11(12):e0168214. PubMed ID: 27992476
[TBL] [Abstract][Full Text] [Related]
17. Detection of statistically significant network changes in complex biological networks.
Mall R; Cerulo L; Bensmail H; Iavarone A; Ceccarelli M
BMC Syst Biol; 2017 Mar; 11(1):32. PubMed ID: 28259158
[TBL] [Abstract][Full Text] [Related]
18. Growing seed genes from time series data and thresholded Boolean networks with perturbation.
Higa CH; Andrade TP; Hashimoto RF
IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(1):37-49. PubMed ID: 23702542
[TBL] [Abstract][Full Text] [Related]
19. Characterizing gene sets using discriminative random walks with restart on heterogeneous biological networks.
Blatti C; Sinha S
Bioinformatics; 2016 Jul; 32(14):2167-75. PubMed ID: 27153592
[TBL] [Abstract][Full Text] [Related]
20. Reconstruction of gene networks using prior knowledge.
Ghanbari M; Lasserre J; Vingron M
BMC Syst Biol; 2015 Nov; 9():84. PubMed ID: 26589494
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
