These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

173 related articles for article (PubMed ID: 23255151)

  • 1. Using the Wash U Epigenome Browser to examine genome-wide sequencing data.
    Zhou X; Wang T
    Curr Protoc Bioinformatics; 2012 Dec; Chapter 10():10.10.1-10.10.14. PubMed ID: 23255151
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The UCSC Cancer Genomics Browser: update 2011.
    Sanborn JZ; Benz SC; Craft B; Szeto C; Kober KM; Meyer L; Vaske CJ; Goldman M; Smith KE; Kuhn RM; Karolchik D; Kent WJ; Stuart JM; Haussler D; Zhu J
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D951-9. PubMed ID: 21059681
    [TBL] [Abstract][Full Text] [Related]  

  • 3. WashU Epigenome Browser update 2022.
    Li D; Purushotham D; Harrison JK; Hsu S; Zhuo X; Fan C; Liu S; Xu V; Chen S; Xu J; Ouyang S; Wu AS; Wang T
    Nucleic Acids Res; 2022 Jul; 50(W1):W774-W781. PubMed ID: 35412637
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparing genomic and epigenomic features across species using the WashU Comparative Epigenome Browser.
    Zhuo X; Hsu S; Purushotham D; Kuntala PK; Harrison JK; Du AY; Chen S; Li D; Wang T
    Genome Res; 2023 May; 33(5):824-835. PubMed ID: 37156621
    [TBL] [Abstract][Full Text] [Related]  

  • 5. WashU Epigenome Browser update 2019.
    Li D; Hsu S; Purushotham D; Sears RL; Wang T
    Nucleic Acids Res; 2019 Jul; 47(W1):W158-W165. PubMed ID: 31165883
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Statistical Viewer: a tool to upload and integrate linkage and association data as plots displayed within the Ensembl genome browser.
    Stenger JE; Xu H; Haynes C; Hauser ER; Pericak-Vance M; Goldschmidt-Clermont PJ; Vance JM
    BMC Bioinformatics; 2005 Apr; 6():95. PubMed ID: 15826305
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The UCSC genome browser and associated tools.
    Kuhn RM; Haussler D; Kent WJ
    Brief Bioinform; 2013 Mar; 14(2):144-61. PubMed ID: 22908213
    [TBL] [Abstract][Full Text] [Related]  

  • 8. CisGenome Browser: a flexible tool for genomic data visualization.
    Jiang H; Wang F; Dyer NP; Wong WH
    Bioinformatics; 2010 Jul; 26(14):1781-2. PubMed ID: 20513664
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Setting Up the JBrowse 2 Genome Browser.
    Diesh C; Buels R; Stevens G; Bridge C; Cain S; Stein L; Holmes I
    Curr Protoc; 2024 Aug; 4(8):e1120. PubMed ID: 39126338
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The UCSC Genome Browser.
    Karolchik D; Hinrichs AS; Kent WJ
    Curr Protoc Bioinformatics; 2012 Dec; Chapter 1():1.4.1-1.4.33. PubMed ID: 23255150
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The UCSC genome browser database: update 2007.
    Kuhn RM; Karolchik D; Zweig AS; Trumbower H; Thomas DJ; Thakkapallayil A; Sugnet CW; Stanke M; Smith KE; Siepel A; Rosenbloom KR; Rhead B; Raney BJ; Pohl A; Pedersen JS; Hsu F; Hinrichs AS; Harte RA; Diekhans M; Clawson H; Bejerano G; Barber GP; Baertsch R; Haussler D; Kent WJ
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D668-73. PubMed ID: 17142222
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser.
    Raney BJ; Dreszer TR; Barber GP; Clawson H; Fujita PA; Wang T; Nguyen N; Paten B; Zweig AS; Karolchik D; Kent WJ
    Bioinformatics; 2014 Apr; 30(7):1003-5. PubMed ID: 24227676
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RNASeqBrowser: a genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks.
    An J; Lai J; Wood DL; Sajjanhar A; Wang C; Tevz G; Lehman ML; Nelson CC
    BMC Genomics; 2015 Mar; 16(1):145. PubMed ID: 25766521
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Epigenomic annotation of genetic variants using the Roadmap Epigenome Browser.
    Zhou X; Li D; Zhang B; Lowdon RF; Rockweiler NB; Sears RL; Madden PA; Smirnov I; Costello JF; Wang T
    Nat Biotechnol; 2015 Apr; 33(4):345-6. PubMed ID: 25690851
    [No Abstract]   [Full Text] [Related]  

  • 15. The UCSC Genome Browser.
    Karolchik D; Hinrichs AS; Kent WJ
    Curr Protoc Bioinformatics; 2007 Mar; Chapter 1():Unit 1.4. PubMed ID: 18428780
    [TBL] [Abstract][Full Text] [Related]  

  • 16. visPIG--a web tool for producing multi-region, multi-track, multi-scale plots of genetic data.
    Scales M; Jäger R; Migliorini G; Houlston RS; Henrion MY
    PLoS One; 2014; 9(9):e107497. PubMed ID: 25208325
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Setting up the JBrowse genome browser.
    Skinner ME; Holmes IH
    Curr Protoc Bioinformatics; 2010 Dec; Chapter 9():Unit 9.13. PubMed ID: 21154710
    [TBL] [Abstract][Full Text] [Related]  

  • 18. STAR: an integrated solution to management and visualization of sequencing data.
    Wang T; Liu J; Shen L; Tonti-Filippini J; Zhu Y; Jia H; Lister R; Whitaker JW; Ecker JR; Millar AH; Ren B; Wang W
    Bioinformatics; 2013 Dec; 29(24):3204-10. PubMed ID: 24078702
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The UCSC Genome Browser.
    Karolchik D; Hinrichs AS; Kent WJ
    Curr Protoc Hum Genet; 2011 Oct; Chapter 18():18.6.1-18.6.33. PubMed ID: 21975940
    [TBL] [Abstract][Full Text] [Related]  

  • 20. ENCODE whole-genome data in the UCSC genome browser (2011 update).
    Raney BJ; Cline MS; Rosenbloom KR; Dreszer TR; Learned K; Barber GP; Meyer LR; Sloan CA; Malladi VS; Roskin KM; Suh BB; Hinrichs AS; Clawson H; Zweig AS; Kirkup V; Fujita PA; Rhead B; Smith KE; Pohl A; Kuhn RM; Karolchik D; Haussler D; Kent WJ
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D871-5. PubMed ID: 21037257
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.