179 related articles for article (PubMed ID: 23272132)
21. An environmental signature for 323 microbial genomes based on codon adaptation indices.
Willenbrock H; Friis C; Juncker AS; Ussery DW
Genome Biol; 2006; 7(12):R114. PubMed ID: 17156429
[TBL] [Abstract][Full Text] [Related]
22. Codon usage bias in radioresistant bacteria.
Dilucca M; Pavlopoulou A; Georgakilas AG; Giansanti A
Gene; 2020 Jun; 742():144554. PubMed ID: 32173539
[TBL] [Abstract][Full Text] [Related]
23. Effect of correlated tRNA abundances on translation errors and evolution of codon usage bias.
Shah P; Gilchrist MA
PLoS Genet; 2010 Sep; 6(9):e1001128. PubMed ID: 20862306
[TBL] [Abstract][Full Text] [Related]
24. Genes optimized by evolution for accurate and fast translation encode in Archaea and Bacteria a broad and characteristic spectrum of protein functions.
von Mandach C; Merkl R
BMC Genomics; 2010 Nov; 11():617. PubMed ID: 21050470
[TBL] [Abstract][Full Text] [Related]
25. Proline codon pair selection determines ribosome pausing strength and translation efficiency in bacteria.
Krafczyk R; Qi F; Sieber A; Mehler J; Jung K; Frishman D; Lassak J
Commun Biol; 2021 May; 4(1):589. PubMed ID: 34002016
[TBL] [Abstract][Full Text] [Related]
26. The selection-mutation-drift theory of synonymous codon usage.
Bulmer M
Genetics; 1991 Nov; 129(3):897-907. PubMed ID: 1752426
[TBL] [Abstract][Full Text] [Related]
27. Optimality of codon usage in Escherichia coli due to load minimization.
Najafabadi HS; Goodarzi H; Torabi N
J Theor Biol; 2005 Nov; 237(2):203-9. PubMed ID: 15932760
[TBL] [Abstract][Full Text] [Related]
28. Generic algorithm to predict the speed of translational elongation: implications for protein biogenesis.
Zhang G; Ignatova Z
PLoS One; 2009; 4(4):e5036. PubMed ID: 19343177
[TBL] [Abstract][Full Text] [Related]
29. Delving deeper into the unexpected correlation between gene expressivity and codon usage bias of Escherichia coli genome.
Kahali B; Basak S; Ghosh TC
J Biomol Struct Dyn; 2008 Jun; 25(6):655-61. PubMed ID: 18399699
[TBL] [Abstract][Full Text] [Related]
30. Enhancing the Translational Capacity of E. coli by Resolving the Codon Bias.
Lipinszki Z; Vernyik V; Farago N; Sari T; Puskas LG; Blattner FR; Posfai G; Gyorfy Z
ACS Synth Biol; 2018 Nov; 7(11):2656-2664. PubMed ID: 30351909
[TBL] [Abstract][Full Text] [Related]
31. Synonymous codon ordering: a subtle but prevalent strategy of bacteria to improve translational efficiency.
Shao ZQ; Zhang YM; Feng XY; Wang B; Chen JQ
PLoS One; 2012; 7(3):e33547. PubMed ID: 22432034
[TBL] [Abstract][Full Text] [Related]
32. On ribosome load, codon bias and protein abundance.
Klumpp S; Dong J; Hwa T
PLoS One; 2012; 7(11):e48542. PubMed ID: 23144899
[TBL] [Abstract][Full Text] [Related]
33. Codon usage revisited: Lack of correlation between codon usage and the number of tRNA genes in enterobacteria.
Rojas J; Castillo G; Leiva LE; Elgamal S; Orellana O; Ibba M; Katz A
Biochem Biophys Res Commun; 2018 Aug; 502(4):450-455. PubMed ID: 29859934
[TBL] [Abstract][Full Text] [Related]
34. Codon usage in bacteria: correlation with gene expressivity.
Gouy M; Gautier C
Nucleic Acids Res; 1982 Nov; 10(22):7055-74. PubMed ID: 6760125
[TBL] [Abstract][Full Text] [Related]
35. Unexpected correlations between gene expression and codon usage bias from microarray data for the whole Escherichia coli K-12 genome.
dos Reis M; Wernisch L; Savva R
Nucleic Acids Res; 2003 Dec; 31(23):6976-85. PubMed ID: 14627830
[TBL] [Abstract][Full Text] [Related]
36. Universal pattern and diverse strengths of successive synonymous codon bias in three domains of life, particularly among prokaryotic genomes.
Guo FB; Ye YN; Zhao HL; Lin D; Wei W
DNA Res; 2012 Dec; 19(6):477-85. PubMed ID: 23132389
[TBL] [Abstract][Full Text] [Related]
37. Characterizing the native codon usages of a genome: an axis projection approach.
Davis JJ; Olsen GJ
Mol Biol Evol; 2011 Jan; 28(1):211-21. PubMed ID: 20679093
[TBL] [Abstract][Full Text] [Related]
38. Translational sensitivity of the Escherichia coli genome to fluctuating tRNA availability.
Wohlgemuth SE; Gorochowski TE; Roubos JA
Nucleic Acids Res; 2013 Sep; 41(17):8021-33. PubMed ID: 23842674
[TBL] [Abstract][Full Text] [Related]
39. Selection against spurious promoter motifs correlates with translational efficiency across bacteria.
Froula JL; Francino MP
PLoS One; 2007 Aug; 2(8):e745. PubMed ID: 17710145
[TBL] [Abstract][Full Text] [Related]
40. Relative codon adaptation: a generic codon bias index for prediction of gene expression.
Fox JM; Erill I
DNA Res; 2010 Jun; 17(3):185-96. PubMed ID: 20453079
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
