These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

200 related articles for article (PubMed ID: 23293000)

  • 1. Conformational dynamics of the human propeller telomeric DNA quadruplex on a microsecond time scale.
    Islam B; Sgobba M; Laughton C; Orozco M; Sponer J; Neidle S; Haider S
    Nucleic Acids Res; 2013 Feb; 41(4):2723-35. PubMed ID: 23293000
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Exploring the Dynamics of Propeller Loops in Human Telomeric DNA Quadruplexes Using Atomistic Simulations.
    Islam B; Stadlbauer P; Gil-Ley A; Pérez-Hernández G; Haider S; Neidle S; Bussi G; Banas P; Otyepka M; Sponer J
    J Chem Theory Comput; 2017 Jun; 13(6):2458-2480. PubMed ID: 28475322
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes.
    Parkinson GN; Cuenca F; Neidle S
    J Mol Biol; 2008 Sep; 381(5):1145-56. PubMed ID: 18619463
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulations.
    Stadlbauer P; Trantírek L; Cheatham TE; Koča J; Sponer J
    Biochimie; 2014 Oct; 105():22-35. PubMed ID: 25038568
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
    Ambrus A; Chen D; Dai J; Bialis T; Jones RA; Yang D
    Nucleic Acids Res; 2006; 34(9):2723-35. PubMed ID: 16714449
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Not so crystal clear: the structure of the human telomere G-quadruplex in solution differs from that present in a crystal.
    Li J; Correia JJ; Wang L; Trent JO; Chaires JB
    Nucleic Acids Res; 2005; 33(14):4649-59. PubMed ID: 16106044
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Characterization of a K+-induced conformational switch in a human telomeric DNA oligonucleotide using 2-aminopurine fluorescence.
    Gray RD; Petraccone L; Trent JO; Chaires JB
    Biochemistry; 2010 Jan; 49(1):179-94. PubMed ID: 19961180
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex.
    Collie GW; Haider SM; Neidle S; Parkinson GN
    Nucleic Acids Res; 2010 Sep; 38(16):5569-80. PubMed ID: 20413582
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Structural dynamics of human telomeric G-quadruplex loops studied by molecular dynamics simulations.
    Zhu H; Xiao S; Liang H
    PLoS One; 2013; 8(8):e71380. PubMed ID: 23951152
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structure of human telomeric DNA in crowded solution.
    Heddi B; Phan AT
    J Am Chem Soc; 2011 Jun; 133(25):9824-33. PubMed ID: 21548653
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structural Dynamics of Lateral and Diagonal Loops of Human Telomeric G-Quadruplexes in Extended MD Simulations.
    Islam B; Stadlbauer P; Krepl M; Havrila M; Haider S; Sponer J
    J Chem Theory Comput; 2018 Oct; 14(10):5011-5026. PubMed ID: 30183284
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Giardia telomeric sequence d(TAGGG)4 forms two intramolecular G-quadruplexes in K+ solution: effect of loop length and sequence on the folding topology.
    Hu L; Lim KW; Bouaziz S; Phan AT
    J Am Chem Soc; 2009 Nov; 131(46):16824-31. PubMed ID: 19874015
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Multiscale simulations of human telomeric G-quadruplex DNA.
    Rebič M; Mocci F; Laaksonen A; Uličný J
    J Phys Chem B; 2015 Jan; 119(1):105-13. PubMed ID: 25469629
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Probing the Binding Pathway of BRACO19 to a Parallel-Stranded Human Telomeric G-Quadruplex Using Molecular Dynamics Binding Simulation with AMBER DNA OL15 and Ligand GAFF2 Force Fields.
    Machireddy B; Kalra G; Jonnalagadda S; Ramanujachary K; Wu C
    J Chem Inf Model; 2017 Nov; 57(11):2846-2864. PubMed ID: 29028340
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Ligand 5,10,15,20-tetra(N-methyl-4-pyridyl)porphine (TMPyP4) prefers the parallel propeller-type human telomeric G-quadruplex DNA over its other polymorphs.
    Ali A; Bansal M; Bhattacharya S
    J Phys Chem B; 2015 Jan; 119(1):5-14. PubMed ID: 25526532
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Intramolecular quadruplex conformation of human telomeric DNA assessed with 125I-radioprobing.
    He Y; Neumann RD; Panyutin IG
    Nucleic Acids Res; 2004; 32(18):5359-67. PubMed ID: 15475390
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Polyethylene glycol binding alters human telomere G-quadruplex structure by conformational selection.
    Buscaglia R; Miller MC; Dean WL; Gray RD; Lane AN; Trent JO; Chaires JB
    Nucleic Acids Res; 2013 Sep; 41(16):7934-46. PubMed ID: 23804761
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Crystal structure of parallel quadruplexes from human telomeric DNA.
    Parkinson GN; Lee MP; Neidle S
    Nature; 2002 Jun; 417(6891):876-80. PubMed ID: 12050675
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers.
    Lim KW; Amrane S; Bouaziz S; Xu W; Mu Y; Patel DJ; Luu KN; Phan AT
    J Am Chem Soc; 2009 Apr; 131(12):4301-9. PubMed ID: 19271707
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Molecular dynamics and principal components analysis of human telomeric quadruplex multimers.
    Haider S; Parkinson GN; Neidle S
    Biophys J; 2008 Jul; 95(1):296-311. PubMed ID: 18375510
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.