These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

127 related articles for article (PubMed ID: 23314574)

  • 1. Bioinformatics analysis of large-scale viral sequences: from construction of data sets to annotation of a phylogenetic tree.
    Munir M
    Virulence; 2013 Jan; 4(1):97-106. PubMed ID: 23314574
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Building (Viral) Phylogenetic Trees Using a Maximum Likelihood Approach.
    King KM; Van Doorslaer K
    Curr Protoc Microbiol; 2018 Nov; 51(1):e63. PubMed ID: 30265446
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling.
    Skums P; Artyomenko A; Glebova O; Ramachandran S; Mandoiu I; Campo DS; Dimitrova Z; Zelikovsky A; Khudyakov Y
    Bioinformatics; 2015 Mar; 31(5):682-90. PubMed ID: 25359889
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Living Trees: High-Quality Reproducible and Reusable Construction of Bacterial Phylogenetic Trees.
    Hu D; Liu B; Wang L; Reeves PR
    Mol Biol Evol; 2020 Feb; 37(2):563-575. PubMed ID: 31633785
    [TBL] [Abstract][Full Text] [Related]  

  • 5. BLAST-EXPLORER helps you building datasets for phylogenetic analysis.
    Dereeper A; Audic S; Claverie JM; Blanc G
    BMC Evol Biol; 2010 Jan; 10():8. PubMed ID: 20067610
    [TBL] [Abstract][Full Text] [Related]  

  • 6. On the quality of tree-based protein classification.
    Lazareva-Ulitsky B; Diemer K; Thomas PD
    Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DPRml: distributed phylogeny reconstruction by maximum likelihood.
    Keane TM; Naughton TJ; Travers SA; McInerney JO; McCormack GP
    Bioinformatics; 2005 Apr; 21(7):969-74. PubMed ID: 15513992
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Phylogenetic supermatrix analysis of GenBank sequences from 2228 papilionoid legumes.
    McMahon MM; Sanderson MJ
    Syst Biol; 2006 Oct; 55(5):818-36. PubMed ID: 17060202
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Efficient error correction for next-generation sequencing of viral amplicons.
    Skums P; Dimitrova Z; Campo DS; Vaughan G; Rossi L; Forbi JC; Yokosawa J; Zelikovsky A; Khudyakov Y
    BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S6. PubMed ID: 22759430
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A new graph-theoretic approach to determine the similarity of genome sequences based on nucleotide triplets.
    Das S; Das A; Bhattacharya DK; Tibarewala DN
    Genomics; 2020 Nov; 112(6):4701-4714. PubMed ID: 32827671
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Global comparison of multiple-segmented viruses in 12-dimensional genome space.
    Huang HH; Yu C; Zheng H; Hernandez T; Yau SC; He RL; Yang J; Yau SS
    Mol Phylogenet Evol; 2014 Dec; 81():29-36. PubMed ID: 25172357
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Origins and challenges of viral dark matter.
    Krishnamurthy SR; Wang D
    Virus Res; 2017 Jul; 239():136-142. PubMed ID: 28192164
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Bioinformatics methods for the comparative analysis of metazoan mitochondrial genome sequences.
    Bernt M; Braband A; Middendorf M; Misof B; Rota-Stabelli O; Stadler PF
    Mol Phylogenet Evol; 2013 Nov; 69(2):320-7. PubMed ID: 23023207
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The PNarec method for detection of ancient recombinations through phylogenetic network analysis.
    Saitou N; Kitano T
    Mol Phylogenet Evol; 2013 Feb; 66(2):507-14. PubMed ID: 23022140
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.
    Fouquier J; Rideout JR; Bolyen E; Chase J; Shiffer A; McDonald D; Knight R; Caporaso JG; Kelley ST
    Microbiome; 2016 Feb; 4():11. PubMed ID: 26905735
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Software Dedicated to Virus Sequence Analysis "Bioinformatics Goes Viral".
    Hölzer M; Marz M
    Adv Virus Res; 2017; 99():233-257. PubMed ID: 29029728
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Network science inspires novel tree shape statistics.
    Chindelevitch L; Hayati M; Poon AFY; Colijn C
    PLoS One; 2021; 16(12):e0259877. PubMed ID: 34941890
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The average common substring approach to phylogenomic reconstruction.
    Ulitsky I; Burstein D; Tuller T; Chor B
    J Comput Biol; 2006 Mar; 13(2):336-50. PubMed ID: 16597244
    [TBL] [Abstract][Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 7.