BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

177 related articles for article (PubMed ID: 23315730)

  • 1. Identification and characterization of spontaneous deletions within the Sp11-Sp12 prophage region of Escherichia coli O157:H7 Sakai.
    Chen C; Lewis CR; Goswami K; Roberts EL; DebRoy C; Dudley EG
    Appl Environ Microbiol; 2013 Mar; 79(6):1934-41. PubMed ID: 23315730
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The defective prophage pool of Escherichia coli O157: prophage-prophage interactions potentiate horizontal transfer of virulence determinants.
    Asadulghani M; Ogura Y; Ooka T; Itoh T; Sawaguchi A; Iguchi A; Nakayama K; Hayashi T
    PLoS Pathog; 2009 May; 5(5):e1000408. PubMed ID: 19412337
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Polymorphic amplified typing sequences provide a novel approach to Escherichia coli O157:H7 strain typing.
    Kudva IT; Evans PS; Perna NT; Barrett TJ; DeCastro GJ; Ausubel FM; Blattner FR; Calderwood SB
    J Clin Microbiol; 2002 Apr; 40(4):1152-9. PubMed ID: 11923324
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak.
    Yokoyama K; Makino K; Kubota Y; Watanabe M; Kimura S; Yutsudo CH; Kurokawa K; Ishii K; Hattori M; Tatsuno I; Abe H; Yoh M; Iida T; Ohnishi M; Hayashi T; Yasunaga T; Honda T; Sasakawa C; Shinagawa H
    Gene; 2000 Nov; 258(1-2):127-39. PubMed ID: 11111050
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak.
    Makino K; Yokoyama K; Kubota Y; Yutsudo CH; Kimura S; Kurokawa K; Ishii K; Hattori M; Tatsuno I; Abe H; Iida T; Yamamoto K; Onishi M; Hayashi T; Yasunaga T; Honda T; Sasakawa C; Shinagawa H
    Genes Genet Syst; 1999 Oct; 74(5):227-39. PubMed ID: 10734605
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Spontaneous recombination between homologous prophage regions causes large-scale inversions within the Escherichia coli O157:H7 chromosome.
    Iguchi A; Iyoda S; Terajima J; Watanabe H; Osawa R
    Gene; 2006 May; 372():199-207. PubMed ID: 16516407
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Rapid determination of Escherichia coli O157:H7 lineage types and molecular subtypes by using comparative genomic fingerprinting.
    Laing C; Pegg C; Yawney D; Ziebell K; Steele M; Johnson R; Thomas JE; Taboada EN; Zhang Y; Gannon VP
    Appl Environ Microbiol; 2008 Nov; 74(21):6606-15. PubMed ID: 18791027
    [TBL] [Abstract][Full Text] [Related]  

  • 8. pulsed-field gel electrophoresis profile changes resulting from spontaneous chromosomal deletions in enterohemorrhagic Escherichia coli O157:H7 during passage in cattle.
    Yoshii N; Ogura Y; Hayashi T; Ajiro T; Sameshima T; Nakazawa M; Kusumoto M; Iwata T; Akiba M
    Appl Environ Microbiol; 2009 Sep; 75(17):5719-26. PubMed ID: 19581472
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evolution of the Stx2-encoding prophage in persistent bovine Escherichia coli O157:H7 strains.
    Park D; Stanton E; Ciezki K; Parrell D; Bozile M; Pike D; Forst SA; Jeong KC; Ivanek R; Döpfer D; Kaspar CW
    Appl Environ Microbiol; 2013 Mar; 79(5):1563-72. PubMed ID: 23275514
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Identification of prophage gene z2389 in Escherichia coli EDL933 encoding a DNA cytosine methyltransferase for full protection of NotI sites.
    Chiou CS; Li HY; Tung SK; Chen CY; Teng CH; Shu JC; Tseng JT; Hsu CY; Chen CC
    Int J Med Microbiol; 2010 Jun; 300(5):296-303. PubMed ID: 20022807
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Phylogenetically related Argentinean and Australian Escherichia coli O157 isolates are distinguished by virulence clades and alternative Shiga toxin 1 and 2 prophages.
    Mellor GE; Sim EM; Barlow RS; D'Astek BA; Galli L; Chinen I; Rivas M; Gobius KS
    Appl Environ Microbiol; 2012 Jul; 78(13):4724-31. PubMed ID: 22544241
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.
    Hayashi T; Makino K; Ohnishi M; Kurokawa K; Ishii K; Yokoyama K; Han CG; Ohtsubo E; Nakayama K; Murata T; Tanaka M; Tobe T; Iida T; Takami H; Honda T; Sasakawa C; Ogasawara N; Yasunaga T; Kuhara S; Shiba T; Hattori M; Shinagawa H
    DNA Res; 2001 Feb; 8(1):11-22. PubMed ID: 11258796
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Escherichia coli O157:H7 Strain EDL933 Harbors Multiple Functional Prophage-Associated Genes Necessary for the Utilization of 5-N-Acetyl-9-O-Acetyl Neuraminic Acid as a Growth Substrate.
    Saile N; Voigt A; Kessler S; Stressler T; Klumpp J; Fischer L; Schmidt H
    Appl Environ Microbiol; 2016 Oct; 82(19):5940-50. PubMed ID: 27474715
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparative genomics analysis and characterization of Shiga toxin-producing Escherichia coli O157:H7 strains reveal virulence genes, resistance genes, prophages and plasmids.
    Naidoo N; Zishiri OT
    BMC Genomics; 2023 Dec; 24(1):791. PubMed ID: 38124028
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Chronological set of E. coli O157:H7 bovine strains establishes a role for repeat sequences and mobile genetic elements in genome diversification.
    Stanton E; Wahlig TA; Park D; Kaspar CW
    BMC Genomics; 2020 Aug; 21(1):562. PubMed ID: 32807088
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A novel transducible chimeric phage from Escherichia coli O157:H7 Sakai strain encoding Stx1 production.
    Sváb D; Bálint B; Maróti G; Tóth I
    Infect Genet Evol; 2015 Jan; 29():42-7. PubMed ID: 25445656
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Multiplex polymerase chain reaction typing scheme based on Escherichia coli O157:H7 Sakai prophage (Sp)-associated genes.
    Tóth I; Bagyinszky E; Sváb D
    Int J Infect Dis; 2022 Jul; 120():68-76. PubMed ID: 35429641
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages.
    Yin S; Rusconi B; Sanjar F; Goswami K; Xiaoli L; Eppinger M; Dudley EG
    BMC Genomics; 2015 Sep; 16():733. PubMed ID: 26416807
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome structural variation in
    Fitzgerald SF; Lupolova N; Shaaban S; Dallman TJ; Greig D; Allison L; Tongue SC; Evans J; Henry MK; McNeilly TN; Bono JL; Gally DL
    Microb Genom; 2021 Nov; 7(11):. PubMed ID: 34751643
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genomic instability in regions adjacent to a highly conserved pch prophage in Escherichia coli O157:H7 generates diversity in expression patterns of the LEE pathogenicity island.
    Yang Z; Kim J; Zhang C; Zhang M; Nietfeldt J; Southward CM; Surette MG; Kachman SD; Benson AK
    J Bacteriol; 2009 Jun; 191(11):3553-68. PubMed ID: 19329643
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.