232 related articles for article (PubMed ID: 23320896)
1. An effective method for network module extraction from microarray data.
Mahanta P; Ahmed HA; Bhattacharyya DK; Kalita JK
BMC Bioinformatics; 2012; 13 Suppl 13(Suppl 13):S4. PubMed ID: 23320896
[TBL] [Abstract][Full Text] [Related]
2. Enhancing biological relevance of a weighted gene co-expression network for functional module identification.
Prom-On S; Chanthaphan A; Chan JH; Meechai A
J Bioinform Comput Biol; 2011 Feb; 9(1):111-29. PubMed ID: 21328709
[TBL] [Abstract][Full Text] [Related]
3. FUMET: a fuzzy network module extraction technique for gene expression data.
Mahanta P; Ahmed HA; Bhattacharyya DK; Ghosh A
J Biosci; 2014 Jun; 39(3):351-64. PubMed ID: 24845500
[TBL] [Abstract][Full Text] [Related]
4. Gene set internal coherence in the context of functional profiling.
Montaner D; Minguez P; Al-Shahrour F; Dopazo J
BMC Genomics; 2009 Apr; 10():197. PubMed ID: 19397819
[TBL] [Abstract][Full Text] [Related]
5. Gene expression network reconstruction by LEP method using microarray data.
You N; Mou P; Qiu T; Kou Q; Zhu H; Chen Y; Wang X
ScientificWorldJournal; 2012; 2012():753430. PubMed ID: 23365528
[TBL] [Abstract][Full Text] [Related]
6. A novel coherence measure for discovering scaling biclusters from gene expression data.
Mukhopadhyay A; Maulik U; Bandyopadhyay S
J Bioinform Comput Biol; 2009 Oct; 7(5):853-68. PubMed ID: 19785049
[TBL] [Abstract][Full Text] [Related]
7. Generalized gene co-expression analysis via subspace clustering using low-rank representation.
Wang T; Zhang J; Huang K
BMC Bioinformatics; 2019 May; 20(Suppl 7):196. PubMed ID: 31074376
[TBL] [Abstract][Full Text] [Related]
8. The condition-dependent transcriptional network in Escherichia coli.
Lemmens K; De Bie T; Dhollander T; Monsieurs P; De Moor B; Collado-Vides J; Engelen K; Marchal K
Ann N Y Acad Sci; 2009 Mar; 1158():29-35. PubMed ID: 19348629
[TBL] [Abstract][Full Text] [Related]
9. Two-pass imputation algorithm for missing value estimation in gene expression time series.
Tsiporkova E; Boeva V
J Bioinform Comput Biol; 2007 Oct; 5(5):1005-22. PubMed ID: 17933008
[TBL] [Abstract][Full Text] [Related]
10. svdPPCS: an effective singular value decomposition-based method for conserved and divergent co-expression gene module identification.
Zhang W; Edwards A; Fan W; Zhu D; Zhang K
BMC Bioinformatics; 2010 Jun; 11():338. PubMed ID: 20565989
[TBL] [Abstract][Full Text] [Related]
11. Analysis of cis-Regulatory Elements in Gene Co-expression Networks in Cancer.
Triska M; Ivliev A; Nikolsky Y; Tatarinova TV
Methods Mol Biol; 2017; 1613():291-310. PubMed ID: 28849565
[TBL] [Abstract][Full Text] [Related]
12. Reconstruction of gene co-expression network from microarray data using local expression patterns.
Roy S; Bhattacharyya DK; Kalita JK
BMC Bioinformatics; 2014; 15 Suppl 7(Suppl 7):S10. PubMed ID: 25079873
[TBL] [Abstract][Full Text] [Related]
13. Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data.
Segal E; Shapira M; Regev A; Pe'er D; Botstein D; Koller D; Friedman N
Nat Genet; 2003 Jun; 34(2):166-76. PubMed ID: 12740579
[TBL] [Abstract][Full Text] [Related]
14. Gene regulatory network clustering for graph layout based on microarray gene expression data.
Kojima K; Imoto S; Nagasaki M; Miyano S
Genome Inform; 2010; 24():84-95. PubMed ID: 22081591
[TBL] [Abstract][Full Text] [Related]
15. Identification of regulatory modules in genome scale transcription regulatory networks.
Song Q; Grene R; Heath LS; Li S
BMC Syst Biol; 2017 Dec; 11(1):140. PubMed ID: 29246163
[TBL] [Abstract][Full Text] [Related]
16. Hierarchical gene selection and genetic fuzzy system for cancer microarray data classification.
Nguyen T; Khosravi A; Creighton D; Nahavandi S
PLoS One; 2015; 10(3):e0120364. PubMed ID: 25823003
[TBL] [Abstract][Full Text] [Related]
17. A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microarray experiments.
Larsen P; Almasri E; Chen G; Dai Y
BMC Bioinformatics; 2007 Aug; 8():317. PubMed ID: 17727721
[TBL] [Abstract][Full Text] [Related]
18. Using directed information to build biologically relevant influence networks.
Rao A; Hero AO; States DJ; Engel JD
Comput Syst Bioinformatics Conf; 2007; 6():145-56. PubMed ID: 17951820
[TBL] [Abstract][Full Text] [Related]
19. A benchmark for statistical microarray data analysis that preserves actual biological and technical variance.
De Hertogh B; De Meulder B; Berger F; Pierre M; Bareke E; Gaigneaux A; Depiereux E
BMC Bioinformatics; 2010 Jan; 11():17. PubMed ID: 20064233
[TBL] [Abstract][Full Text] [Related]
20. Latent variable and nICA modeling of pathway gene module composite.
Gong T; Zhu Y; Xuan J; Li H; Clarke R; Hoffman EP; Wang Y
Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():5872-5. PubMed ID: 17946342
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]