BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

187 related articles for article (PubMed ID: 23329415)

  • 21. Quality control, analysis and secure sharing of Luminex® immunoassay data using the open source LabKey Server platform.
    Eckels J; Nathe C; Nelson EK; Shoemaker SG; Nostrand EV; Yates NL; Ashley VC; Harris LJ; Bollenbeck M; Fong Y; Tomaras GD; Piehler B
    BMC Bioinformatics; 2013 Apr; 14():145. PubMed ID: 23631706
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Saint: a lightweight integration environment for model annotation.
    Lister AL; Pocock M; Taschuk M; Wipat A
    Bioinformatics; 2009 Nov; 25(22):3026-7. PubMed ID: 19734151
    [TBL] [Abstract][Full Text] [Related]  

  • 23. The design of Jemboss: a graphical user interface to EMBOSS.
    Carver T; Bleasby A
    Bioinformatics; 2003 Sep; 19(14):1837-43. PubMed ID: 14512356
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.
    Raue A; Steiert B; Schelker M; Kreutz C; Maiwald T; Hass H; Vanlier J; Tönsing C; Adlung L; Engesser R; Mader W; Heinemann T; Hasenauer J; Schilling M; Höfer T; Klipp E; Theis F; Klingmüller U; Schöberl B; Timmer J
    Bioinformatics; 2015 Nov; 31(21):3558-60. PubMed ID: 26142188
    [TBL] [Abstract][Full Text] [Related]  

  • 25. OMSSAGUI: An open-source user interface component to configure and run the OMSSA search engine.
    Tharakan R; Martens L; Van Eyk JE; Graham DR
    Proteomics; 2008 Jun; 8(12):2376-8. PubMed ID: 18563730
    [TBL] [Abstract][Full Text] [Related]  

  • 26. JSBML: a flexible Java library for working with SBML.
    Dräger A; Rodriguez N; Dumousseau M; Dörr A; Wrzodek C; Le Novère N; Zell A; Hucka M
    Bioinformatics; 2011 Aug; 27(15):2167-8. PubMed ID: 21697129
    [TBL] [Abstract][Full Text] [Related]  

  • 27. PathVisio-Faceted Search: an exploration tool for multi-dimensional navigation of large pathways.
    Fried JY; van Iersel MP; Aladjem MI; Kohn KW; Luna A
    Bioinformatics; 2013 Jun; 29(11):1465-6. PubMed ID: 23547033
    [TBL] [Abstract][Full Text] [Related]  

  • 28. MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics.
    Egea JA; Henriques D; Cokelaer T; Villaverde AF; MacNamara A; Danciu DP; Banga JR; Saez-Rodriguez J
    BMC Bioinformatics; 2014 May; 15():136. PubMed ID: 24885957
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Stochastic simulation GUI for biochemical networks.
    Vallabhajosyula RR; Sauro HM
    Bioinformatics; 2007 Jul; 23(14):1859-61. PubMed ID: 17586553
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Biographer: web-based editing and rendering of SBGN compliant biochemical networks.
    Krause F; Schulz M; Ripkens B; Flöttmann M; Krantz M; Klipp E; Handorf T
    Bioinformatics; 2013 Jun; 29(11):1467-8. PubMed ID: 23574737
    [TBL] [Abstract][Full Text] [Related]  

  • 31. JSBML 1.0: providing a smorgasbord of options to encode systems biology models.
    Rodriguez N; Thomas A; Watanabe L; Vazirabad IY; Kofia V; Gómez HF; Mittag F; Matthes J; Rudolph J; Wrzodek F; Netz E; Diamantikos A; Eichner J; Keller R; Wrzodek C; Fröhlich S; Lewis NE; Myers CJ; Le Novère N; Palsson BØ; Hucka M; Dräger A
    Bioinformatics; 2015 Oct; 31(20):3383-6. PubMed ID: 26079347
    [TBL] [Abstract][Full Text] [Related]  

  • 32. StrBioLib: a Java library for development of custom computational structural biology applications.
    Chandonia JM
    Bioinformatics; 2007 Aug; 23(15):2018-20. PubMed ID: 17537750
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Software support for SBGN maps: SBGN-ML and LibSBGN.
    van Iersel MP; Villéger AC; Czauderna T; Boyd SE; Bergmann FT; Luna A; Demir E; Sorokin A; Dogrusoz U; Matsuoka Y; Funahashi A; Aladjem MI; Mi H; Moodie SL; Kitano H; Le Novère N; Schreiber F
    Bioinformatics; 2012 Aug; 28(15):2016-21. PubMed ID: 22581176
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Metingear: a development environment for annotating genome-scale metabolic models.
    May JW; James AG; Steinbeck C
    Bioinformatics; 2013 Sep; 29(17):2213-5. PubMed ID: 23766418
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Apollo: a community resource for genome annotation editing.
    Lee E; Harris N; Gibson M; Chetty R; Lewis S
    Bioinformatics; 2009 Jul; 25(14):1836-7. PubMed ID: 19439563
    [TBL] [Abstract][Full Text] [Related]  

  • 36. SBML-PET: a Systems Biology Markup Language-based parameter estimation tool.
    Zi Z; Klipp E
    Bioinformatics; 2006 Nov; 22(21):2704-5. PubMed ID: 16926221
    [TBL] [Abstract][Full Text] [Related]  

  • 37. BioRuby: bioinformatics software for the Ruby programming language.
    Goto N; Prins P; Nakao M; Bonnal R; Aerts J; Katayama T
    Bioinformatics; 2010 Oct; 26(20):2617-9. PubMed ID: 20739307
    [TBL] [Abstract][Full Text] [Related]  

  • 38. The systems biology format converter.
    Rodriguez N; Pettit JB; Dalle Pezze P; Li L; Henry A; van Iersel MP; Jalowicki G; Kutmon M; Natarajan KN; Tolnay D; Stefan MI; Evelo CT; Le Novère N
    BMC Bioinformatics; 2016 Apr; 17():154. PubMed ID: 27044654
    [TBL] [Abstract][Full Text] [Related]  

  • 39. prfectBLAST: a platform-independent portable front end for the command terminal BLAST+ stand-alone suite.
    Santiago-Sotelo P; Ramirez-Prado JH
    Biotechniques; 2012 Nov; 53(5):299-300. PubMed ID: 23148880
    [TBL] [Abstract][Full Text] [Related]  

  • 40. SPSens: a software package for stochastic parameter sensitivity analysis of biochemical reaction networks.
    Sheppard PW; Rathinam M; Khammash M
    Bioinformatics; 2013 Jan; 29(1):140-2. PubMed ID: 23104889
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.