277 related articles for article (PubMed ID: 23354917)
1. Protein interactions, post-translational modifications and topologies in human cells.
Chavez JD; Weisbrod CR; Zheng C; Eng JK; Bruce JE
Mol Cell Proteomics; 2013 May; 12(5):1451-67. PubMed ID: 23354917
[TBL] [Abstract][Full Text] [Related]
2. Prediction of an Upper Limit for the Fraction of Interprotein Cross-Links in Large-Scale In Vivo Cross-Linking Studies.
Keller A; Chavez JD; Felt KC; Bruce JE
J Proteome Res; 2019 Aug; 18(8):3077-3085. PubMed ID: 31267744
[TBL] [Abstract][Full Text] [Related]
3. In vivo protein complex topologies: sights through a cross-linking lens.
Bruce JE
Proteomics; 2012 May; 12(10):1565-75. PubMed ID: 22610688
[TBL] [Abstract][Full Text] [Related]
4. Affinity and chemical enrichment strategies for mapping low-abundance protein modifications and protein-interaction networks.
Zacharias AO; Fang Z; Rahman A; Talukder A; Cornelius S; Chowdhury SM
J Sep Sci; 2021 Jan; 44(1):310-322. PubMed ID: 33289315
[TBL] [Abstract][Full Text] [Related]
5. Molecular Details Underlying Dynamic Structures and Regulation of the Human 26S Proteasome.
Wang X; Cimermancic P; Yu C; Schweitzer A; Chopra N; Engel JL; Greenberg C; Huszagh AS; Beck F; Sakata E; Yang Y; Novitsky EJ; Leitner A; Nanni P; Kahraman A; Guo X; Dixon JE; Rychnovsky SD; Aebersold R; Baumeister W; Sali A; Huang L
Mol Cell Proteomics; 2017 May; 16(5):840-854. PubMed ID: 28292943
[TBL] [Abstract][Full Text] [Related]
6. Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry.
Liu F; Rijkers DT; Post H; Heck AJ
Nat Methods; 2015 Dec; 12(12):1179-84. PubMed ID: 26414014
[TBL] [Abstract][Full Text] [Related]
7. Chromatin affinity purification and quantitative mass spectrometry defining the interactome of histone modification patterns.
Nikolov M; Stützer A; Mosch K; Krasauskas A; Soeroes S; Stark H; Urlaub H; Fischle W
Mol Cell Proteomics; 2011 Nov; 10(11):M110.005371. PubMed ID: 21836164
[TBL] [Abstract][Full Text] [Related]
8. Cross-linking Mass Spectrometry Analysis of the Yeast Nucleus Reveals Extensive Protein-Protein Interactions Not Detected by Systematic Two-Hybrid or Affinity Purification-Mass Spectrometry.
Bartolec TK; Smith DL; Pang CNI; Xu YD; Hamey JJ; Wilkins MR
Anal Chem; 2020 Jan; 92(2):1874-1882. PubMed ID: 31851481
[No Abstract] [Full Text] [Related]
9. Bioinformatics Analysis of PTM-Modified Protein Interaction Networks and Complexes.
Woodsmith J; Stelzl U; Vinayagam A
Methods Mol Biol; 2017; 1558():321-332. PubMed ID: 28150245
[TBL] [Abstract][Full Text] [Related]
10. Protein-protein cross-linking and human health: the challenge of elucidating with mass spectrometry.
Maes E; Dyer JM; McKerchar HJ; Deb-Choudhury S; Clerens S
Expert Rev Proteomics; 2017 Oct; 14(10):917-929. PubMed ID: 28759730
[TBL] [Abstract][Full Text] [Related]
11. In vivo protein interaction network identified with a novel real-time cross-linked peptide identification strategy.
Weisbrod CR; Chavez JD; Eng JK; Yang L; Zheng C; Bruce JE
J Proteome Res; 2013 Apr; 12(4):1569-79. PubMed ID: 23413883
[TBL] [Abstract][Full Text] [Related]
12. Protein Interaction Domains and Post-Translational Modifications: Structural Features and Drug Discovery Applications.
Vincenzi M; Mercurio FA; Leone M
Curr Med Chem; 2020; 27(37):6306-6355. PubMed ID: 31250750
[TBL] [Abstract][Full Text] [Related]
13. Cross-linking measurements of in vivo protein complex topologies.
Zheng C; Yang L; Hoopmann MR; Eng JK; Tang X; Weisbrod CR; Bruce JE
Mol Cell Proteomics; 2011 Oct; 10(10):M110.006841. PubMed ID: 21697552
[TBL] [Abstract][Full Text] [Related]
14. A map of general and specialized chromatin readers in mouse tissues generated by label-free interaction proteomics.
Eberl HC; Spruijt CG; Kelstrup CD; Vermeulen M; Mann M
Mol Cell; 2013 Jan; 49(2):368-78. PubMed ID: 23201125
[TBL] [Abstract][Full Text] [Related]
15. Investigation of stable and transient protein-protein interactions: Past, present, and future.
Ngounou Wetie AG; Sokolowska I; Woods AG; Roy U; Loo JA; Darie CC
Proteomics; 2013 Feb; 13(3-4):538-57. PubMed ID: 23193082
[TBL] [Abstract][Full Text] [Related]
16. ISPTM: an iterative search algorithm for systematic identification of post-translational modifications from complex proteome mixtures.
Huang X; Huang L; Peng H; Guru A; Xue W; Hong SY; Liu M; Sharma S; Fu K; Caprez AP; Swanson DR; Zhang Z; Ding SJ
J Proteome Res; 2013 Sep; 12(9):3831-42. PubMed ID: 23919725
[TBL] [Abstract][Full Text] [Related]
17. Probing the protein interaction network of Pseudomonas aeruginosa cells by chemical cross-linking mass spectrometry.
Navare AT; Chavez JD; Zheng C; Weisbrod CR; Eng JK; Siehnel R; Singh PK; Manoil C; Bruce JE
Structure; 2015 Apr; 23(4):762-73. PubMed ID: 25800553
[TBL] [Abstract][Full Text] [Related]
18. An emerin "proteome": purification of distinct emerin-containing complexes from HeLa cells suggests molecular basis for diverse roles including gene regulation, mRNA splicing, signaling, mechanosensing, and nuclear architecture.
Holaska JM; Wilson KL
Biochemistry; 2007 Jul; 46(30):8897-908. PubMed ID: 17620012
[TBL] [Abstract][Full Text] [Related]
19. Leveraging the Entirety of the Protein Data Bank to Enable Improved Structure Prediction Based on Cross-Link Data.
Keller A; Chavez JD; Tang X; Bruce JE
J Proteome Res; 2021 Jan; 20(1):1087-1095. PubMed ID: 33263396
[TBL] [Abstract][Full Text] [Related]
20. A web of possibilities: network-based discovery of protein interaction codes.
Winter DL; Erce MA; Wilkins MR
J Proteome Res; 2014 Dec; 13(12):5333-8. PubMed ID: 25337985
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
