BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

112 related articles for article (PubMed ID: 23367183)

  • 1. SVM-based prediction of the calpain degradome using Bayes Feature Extraction.
    Wee LJ; Low HM
    Annu Int Conf IEEE Eng Med Biol Soc; 2012; 2012():5534-40. PubMed ID: 23367183
    [TBL] [Abstract][Full Text] [Related]  

  • 2. In silico prediction of the granzyme B degradome.
    Wee LJ; Er EP; Ng LF; Tong JC
    BMC Genomics; 2011 Nov; 12 Suppl 3(Suppl 3):S11. PubMed ID: 22479704
    [TBL] [Abstract][Full Text] [Related]  

  • 3. CalCleaveMKL: a Tool for Calpain Cleavage Prediction.
    duVerle DA; Mamitsuka H
    Methods Mol Biol; 2019; 1915():121-147. PubMed ID: 30617801
    [TBL] [Abstract][Full Text] [Related]  

  • 4. LabCaS: labeling calpain substrate cleavage sites from amino acid sequence using conditional random fields.
    Fan YX; Zhang Y; Shen HB
    Proteins; 2013 Apr; 81(4):622-34. PubMed ID: 23180633
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Calpain cleavage prediction using multiple kernel learning.
    DuVerle DA; Ono Y; Sorimachi H; Mamitsuka H
    PLoS One; 2011 May; 6(5):e19035. PubMed ID: 21559271
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array.
    Shinkai-Ouchi F; Koyama S; Ono Y; Hata S; Ojima K; Shindo M; duVerle D; Ueno M; Kitamura F; Doi N; Takigawa I; Mamitsuka H; Sorimachi H
    Mol Cell Proteomics; 2016 Apr; 15(4):1262-80. PubMed ID: 26796116
    [TBL] [Abstract][Full Text] [Related]  

  • 7. CaMPDB: a resource for calpain and modulatory proteolysis.
    duVerle D; Takigawa I; Ono Y; Sorimachi H; Mamitsuka H
    Genome Inform; 2010 Jan; 22():202-13. PubMed ID: 20238430
    [TBL] [Abstract][Full Text] [Related]  

  • 8. LabCaS for Ranking Potential Calpain Substrate Cleavage Sites from Amino Acid Sequence.
    Fan YX; Pan X; Zhang Y; Shen HB
    Methods Mol Biol; 2019; 1915():111-120. PubMed ID: 30617800
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SVM-based prediction of linear B-cell epitopes using Bayes Feature Extraction.
    Wee LJ; Simarmata D; Kam YW; Ng LF; Tong JC
    BMC Genomics; 2010 Dec; 11 Suppl 4(Suppl 4):S21. PubMed ID: 21143805
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A review of statistical methods for prediction of proteolytic cleavage.
    duVerle DA; Mamitsuka H
    Brief Bioinform; 2012 May; 13(3):337-49. PubMed ID: 22138323
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Understanding the substrate specificity of conventional calpains.
    Sorimachi H; Mamitsuka H; Ono Y
    Biol Chem; 2012 Sep; 393(9):853-71. PubMed ID: 22944687
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Seminal quality prediction using data mining methods.
    Sahoo AJ; Kumar Y
    Technol Health Care; 2014; 22(4):531-45. PubMed ID: 24898862
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Site-directed mutagenesis of alpha II spectrin at codon 1175 modulates its mu-calpain susceptibility.
    Stabach PR; Cianci CD; Glantz SB; Zhang Z; Morrow JS
    Biochemistry; 1997 Jan; 36(1):57-65. PubMed ID: 8993318
    [TBL] [Abstract][Full Text] [Related]  

  • 14. LBSizeCleav: improved support vector machine (SVM)-based prediction of Dicer cleavage sites using loop/bulge length.
    Bao Y; Hayashida M; Akutsu T
    BMC Bioinformatics; 2016 Nov; 17(1):487. PubMed ID: 27887571
    [TBL] [Abstract][Full Text] [Related]  

  • 15. GPS-CCD: a novel computational program for the prediction of calpain cleavage sites.
    Liu Z; Cao J; Gao X; Ma Q; Ren J; Xue Y
    PLoS One; 2011 Apr; 6(4):e19001. PubMed ID: 21533053
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SVM-based prediction of caspase substrate cleavage sites.
    Wee LJ; Tan TW; Ranganathan S
    BMC Bioinformatics; 2006 Dec; 7 Suppl 5(Suppl 5):S14. PubMed ID: 17254298
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Calcium-Activated Calpain Specifically Cleaves Glutamate Receptor IIA But Not IIB at the
    Metwally E; Zhao G; Li W; Wang Q; Zhang YQ
    J Neurosci; 2019 Apr; 39(15):2776-2791. PubMed ID: 30705102
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A multi-factor model for caspase degradome prediction.
    Wee LJ; Tong JC; Tan TW; Ranganathan S
    BMC Genomics; 2009 Dec; 10 Suppl 3(Suppl 3):S6. PubMed ID: 19958504
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An easy-to-use FRET protein substrate to detect calpain cleavage in vitro and in vivo.
    McCartney CE; MacLeod JA; Greer PA; Davies PL
    Biochim Biophys Acta Mol Cell Res; 2018 Feb; 1865(2):221-230. PubMed ID: 29104086
    [TBL] [Abstract][Full Text] [Related]  

  • 20. CASVM: web server for SVM-based prediction of caspase substrates cleavage sites.
    Wee LJ; Tan TW; Ranganathan S
    Bioinformatics; 2007 Dec; 23(23):3241-3. PubMed ID: 17599937
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.