142 related articles for article (PubMed ID: 23394478)
1. Multiple consensus trees: a method to separate divergent genes.
Guénoche A
BMC Bioinformatics; 2013 Feb; 14():46. PubMed ID: 23394478
[TBL] [Abstract][Full Text] [Related]
2. A new fast method for inferring multiple consensus trees using k-medoids.
Tahiri N; Willems M; Makarenkov V
BMC Evol Biol; 2018 Apr; 18(1):48. PubMed ID: 29621975
[TBL] [Abstract][Full Text] [Related]
3. Trees of trees: an approach to comparing multiple alternative phylogenies.
Nye TM
Syst Biol; 2008 Oct; 57(5):785-94. PubMed ID: 18853364
[TBL] [Abstract][Full Text] [Related]
4. Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests.
Abby SS; Tannier E; Gouy M; Daubin V
BMC Bioinformatics; 2010 Jun; 11():324. PubMed ID: 20550700
[TBL] [Abstract][Full Text] [Related]
5. Genome trees constructed using five different approaches suggest new major bacterial clades.
Wolf YI; Rogozin IB; Grishin NV; Tatusov RL; Koonin EV
BMC Evol Biol; 2001 Oct; 1():8. PubMed ID: 11734060
[TBL] [Abstract][Full Text] [Related]
6. On the quality of tree-based protein classification.
Lazareva-Ulitsky B; Diemer K; Thomas PD
Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
[TBL] [Abstract][Full Text] [Related]
7. Reconciliation and local gene tree rearrangement can be of mutual profit.
Nguyen TH; Ranwez V; Pointet S; Chifolleau AM; Doyon JP; Berry V
Algorithms Mol Biol; 2013 Apr; 8(1):12. PubMed ID: 23566548
[TBL] [Abstract][Full Text] [Related]
8. Improved parameterized complexity of the maximum agreement subtree and maximum compatible tree problems.
Berry V; Nicolas F
IEEE/ACM Trans Comput Biol Bioinform; 2006; 3(3):289-302. PubMed ID: 17048466
[TBL] [Abstract][Full Text] [Related]
9. ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony.
Jacox E; Chauve C; Szöllősi GJ; Ponty Y; Scornavacca C
Bioinformatics; 2016 Jul; 32(13):2056-8. PubMed ID: 27153713
[TBL] [Abstract][Full Text] [Related]
10. Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes.
Mirkin BG; Fenner TI; Galperin MY; Koonin EV
BMC Evol Biol; 2003 Jan; 3():2. PubMed ID: 12515582
[TBL] [Abstract][Full Text] [Related]
11. Phylogenetic identification of lateral genetic transfer events.
Beiko RG; Hamilton N
BMC Evol Biol; 2006 Feb; 6():15. PubMed ID: 16472400
[TBL] [Abstract][Full Text] [Related]
12. A fast method for calculating reliable event supports in tree reconciliations via Pareto optimality.
To TH; Jacox E; Ranwez V; Scornavacca C
BMC Bioinformatics; 2015 Nov; 16():384. PubMed ID: 26573665
[TBL] [Abstract][Full Text] [Related]
13. Cubic time algorithms of amalgamating gene trees and building evolutionary scenarios.
Lyubetsky VA; Rubanov LI; Rusin LY; Gorbunov KY
Biol Direct; 2012 Dec; 7():48. PubMed ID: 23259766
[TBL] [Abstract][Full Text] [Related]
14. Species Tree Inference Using a Mixture Model.
Ullah I; Parviainen P; Lagergren J
Mol Biol Evol; 2015 Sep; 32(9):2469-82. PubMed ID: 25963975
[TBL] [Abstract][Full Text] [Related]
15. Reconstructing a SuperGeneTree minimizing reconciliation.
Lafond M; Ouangraoua A; El-Mabrouk N
BMC Bioinformatics; 2015; 16 Suppl 14(Suppl 14):S4. PubMed ID: 26451911
[TBL] [Abstract][Full Text] [Related]
16. BranchClust: a phylogenetic algorithm for selecting gene families.
Poptsova MS; Gogarten JP
BMC Bioinformatics; 2007 Apr; 8():120. PubMed ID: 17425803
[TBL] [Abstract][Full Text] [Related]
17. Resolution and reconciliation of non-binary gene trees with transfers, duplications and losses.
Jacox E; Weller M; Tannier E; Scornavacca C
Bioinformatics; 2017 Apr; 33(7):980-987. PubMed ID: 28073758
[TBL] [Abstract][Full Text] [Related]
18. iGTP: a software package for large-scale gene tree parsimony analysis.
Chaudhary R; Bansal MS; Wehe A; Fernández-Baca D; Eulenstein O
BMC Bioinformatics; 2010 Nov; 11():574. PubMed ID: 21092314
[TBL] [Abstract][Full Text] [Related]
19. Pruning rogue taxa improves phylogenetic accuracy: an efficient algorithm and webservice.
Aberer AJ; Krompass D; Stamatakis A
Syst Biol; 2013 Jan; 62(1):162-6. PubMed ID: 22962004
[TBL] [Abstract][Full Text] [Related]
20. Algorithms: simultaneous error-correction and rooting for gene tree reconciliation and the gene duplication problem.
Górecki P; Eulenstein O
BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S14. PubMed ID: 22759419
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
