These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

173 related articles for article (PubMed ID: 23395730)

  • 1. A practical guide for the functional annotation of genetic variations using SNPnexus.
    Dayem Ullah AZ; Lemoine NR; Chelala C
    Brief Bioinform; 2013 Jul; 14(4):437-47. PubMed ID: 23395730
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SNPnexus: a web server for functional annotation of novel and publicly known genetic variants (2012 update).
    Dayem Ullah AZ; Lemoine NR; Chelala C
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W65-70. PubMed ID: 22544707
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SNPnexus: a web database for functional annotation of newly discovered and public domain single nucleotide polymorphisms.
    Chelala C; Khan A; Lemoine NR
    Bioinformatics; 2009 Mar; 25(5):655-61. PubMed ID: 19098027
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SNPnexus: assessing the functional relevance of genetic variation to facilitate the promise of precision medicine.
    Dayem Ullah AZ; Oscanoa J; Wang J; Nagano A; Lemoine NR; Chelala C
    Nucleic Acids Res; 2018 Jul; 46(W1):W109-W113. PubMed ID: 29757393
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SNPnexus: a web server for functional annotation of human genome sequence variation (2020 update).
    Oscanoa J; Sivapalan L; Gadaleta E; Dayem Ullah AZ; Lemoine NR; Chelala C
    Nucleic Acids Res; 2020 Jul; 48(W1):W185-W192. PubMed ID: 32496546
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MycoBASE: expanding the functional annotation coverage of mycobacterial genomes.
    Garcia BJ; Datta G; Davidson RM; Strong M
    BMC Genomics; 2015 Dec; 16():1102. PubMed ID: 26704706
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Snat: a SNP annotation tool for bovine by integrating various sources of genomic information.
    Jiang J; Jiang L; Zhou B; Fu W; Liu JF; Zhang Q
    BMC Genet; 2011 Oct; 12():85. PubMed ID: 21982513
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Transcript annotation tool (TransAT): an R package for retrieving annotations for transcript-specific genetic variants.
    Shih CY; Chattopadhyay A; Wu CH; Tien YW; Lu TP
    BMC Bioinformatics; 2021 Jun; 22(1):350. PubMed ID: 34182919
    [TBL] [Abstract][Full Text] [Related]  

  • 9. GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data.
    Araujo FA; Barh D; Silva A; Guimarães L; Ramos RTJ
    Sci Rep; 2018 Jan; 8(1):1794. PubMed ID: 29379090
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Functional annotation of genomic variants in studies of late-onset Alzheimer's disease.
    Butkiewicz M; Blue EE; Leung YY; Jian X; Marcora E; Renton AE; Kuzma A; Wang LS; Koboldt DC; Haines JL; Bush WS
    Bioinformatics; 2018 Aug; 34(16):2724-2731. PubMed ID: 29590295
    [TBL] [Abstract][Full Text] [Related]  

  • 11. VannoPortal: multiscale functional annotation of human genetic variants for interrogating molecular mechanism of traits and diseases.
    Huang D; Zhou Y; Yi X; Fan X; Wang J; Yao H; Sham PC; Hao J; Chen K; Li MJ
    Nucleic Acids Res; 2022 Jan; 50(D1):D1408-D1416. PubMed ID: 34570217
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SNiPA: an interactive, genetic variant-centered annotation browser.
    Arnold M; Raffler J; Pfeufer A; Suhre K; Kastenmüller G
    Bioinformatics; 2015 Apr; 31(8):1334-6. PubMed ID: 25431330
    [TBL] [Abstract][Full Text] [Related]  

  • 13. VARAdb: a comprehensive variation annotation database for human.
    Pan Q; Liu YJ; Bai XF; Han XL; Jiang Y; Ai B; Shi SS; Wang F; Xu MC; Wang YZ; Zhao J; Chen JX; Zhang J; Li XC; Zhu J; Zhang GR; Wang QY; Li CQ
    Nucleic Acids Res; 2021 Jan; 49(D1):D1431-D1444. PubMed ID: 33095866
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genome analysis and knowledge-driven variant interpretation with TGex.
    Dahary D; Golan Y; Mazor Y; Zelig O; Barshir R; Twik M; Iny Stein T; Rosner G; Kariv R; Chen F; Zhang Q; Shen Y; Safran M; Lancet D; Fishilevich S
    BMC Med Genomics; 2019 Dec; 12(1):200. PubMed ID: 31888639
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Genomic variant annotation and prioritization with ANNOVAR and wANNOVAR.
    Yang H; Wang K
    Nat Protoc; 2015 Oct; 10(10):1556-66. PubMed ID: 26379229
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A comprehensive collection of annotations to interpret sequence variation in human mitochondrial transfer RNAs.
    Diroma MA; Lubisco P; Attimonelli M
    BMC Bioinformatics; 2016 Nov; 17(Suppl 12):338. PubMed ID: 28185569
    [TBL] [Abstract][Full Text] [Related]  

  • 17. FEATnotator: A tool for integrated annotation of sequence features and variation, facilitating interpretation in genomics experiments.
    Podicheti R; Mockaitis K
    Methods; 2015 Jun; 79-80():11-7. PubMed ID: 25934264
    [TBL] [Abstract][Full Text] [Related]  

  • 18. FAVOR: functional annotation of variants online resource and annotator for variation across the human genome.
    Zhou H; Arapoglou T; Li X; Li Z; Zheng X; Moore J; Asok A; Kumar S; Blue EE; Buyske S; Cox N; Felsenfeld A; Gerstein M; Kenny E; Li B; Matise T; Philippakis A; Rehm HL; Sofia HJ; Snyder G; ; Weng Z; Neale B; Sunyaev SR; Lin X
    Nucleic Acids Res; 2023 Jan; 51(D1):D1300-D1311. PubMed ID: 36350676
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Annotation of functional variation in personal genomes using RegulomeDB.
    Boyle AP; Hong EL; Hariharan M; Cheng Y; Schaub MA; Kasowski M; Karczewski KJ; Park J; Hitz BC; Weng S; Cherry JM; Snyder M
    Genome Res; 2012 Sep; 22(9):1790-7. PubMed ID: 22955989
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DFLAT: functional annotation for human development.
    Wick HC; Drabkin H; Ngu H; Sackman M; Fournier C; Haggett J; Blake JA; Bianchi DW; Slonim DK
    BMC Bioinformatics; 2014 Feb; 15():45. PubMed ID: 24507166
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.