240 related articles for article (PubMed ID: 23409705)
1. Gaussian process-based Bayesian nonparametric inference of population size trajectories from gene genealogies.
Palacios JA; Minin VN
Biometrics; 2013 Mar; 69(1):8-18. PubMed ID: 23409705
[TBL] [Abstract][Full Text] [Related]
2. Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics.
Minin VN; Bloomquist EW; Suchard MA
Mol Biol Evol; 2008 Jul; 25(7):1459-71. PubMed ID: 18408232
[TBL] [Abstract][Full Text] [Related]
3. A parametric interpretation of Bayesian Nonparametric Inference from Gene Genealogies: Linking ecological, population genetics and evolutionary processes.
Ponciano JM
Theor Popul Biol; 2018 Jul; 122():128-136. PubMed ID: 29174634
[TBL] [Abstract][Full Text] [Related]
4. Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci.
Gill MS; Lemey P; Faria NR; Rambaut A; Shapiro B; Suchard MA
Mol Biol Evol; 2013 Mar; 30(3):713-24. PubMed ID: 23180580
[TBL] [Abstract][Full Text] [Related]
5. Bayesian Nonparametric Inference of Population Size Changes from Sequential Genealogies.
Palacios JA; Wakeley J; Ramachandran S
Genetics; 2015 Sep; 201(1):281-304. PubMed ID: 26224734
[TBL] [Abstract][Full Text] [Related]
6. Inferring epidemiological dynamics with Bayesian coalescent inference: the merits of deterministic and stochastic models.
Popinga A; Vaughan T; Stadler T; Drummond AJ
Genetics; 2015 Feb; 199(2):595-607. PubMed ID: 25527289
[TBL] [Abstract][Full Text] [Related]
7. Optimal point process filtering and estimation of the coalescent process.
Parag KV; Pybus OG
J Theor Biol; 2017 May; 421():153-167. PubMed ID: 28385666
[TBL] [Abstract][Full Text] [Related]
8. Understanding Past Population Dynamics: Bayesian Coalescent-Based Modeling with Covariates.
Gill MS; Lemey P; Bennett SN; Biek R; Suchard MA
Syst Biol; 2016 Nov; 65(6):1041-1056. PubMed ID: 27368344
[TBL] [Abstract][Full Text] [Related]
9. Horseshoe-based Bayesian nonparametric estimation of effective population size trajectories.
Faulkner JR; Magee AF; Shapiro B; Minin VN
Biometrics; 2020 Sep; 76(3):677-690. PubMed ID: 32277713
[TBL] [Abstract][Full Text] [Related]
10. An efficient Bayesian inference framework for coalescent-based nonparametric phylodynamics.
Lan S; Palacios JA; Karcher M; Minin VN; Shahbaba B
Bioinformatics; 2015 Oct; 31(20):3282-9. PubMed ID: 26093147
[TBL] [Abstract][Full Text] [Related]
11. Inference of demographic history from genealogical trees using reversible jump Markov chain Monte Carlo.
Opgen-Rhein R; Fahrmeir L; Strimmer K
BMC Evol Biol; 2005 Jan; 5():6. PubMed ID: 15663782
[TBL] [Abstract][Full Text] [Related]
12. Estimating effective population size changes from preferentially sampled genetic sequences.
Karcher MD; Carvalho LM; Suchard MA; Dudas G; Minin VN
PLoS Comput Biol; 2020 Oct; 16(10):e1007774. PubMed ID: 33044955
[TBL] [Abstract][Full Text] [Related]
13. Bayesian coalescent inference of past population dynamics from molecular sequences.
Drummond AJ; Rambaut A; Shapiro B; Pybus OG
Mol Biol Evol; 2005 May; 22(5):1185-92. PubMed ID: 15703244
[TBL] [Abstract][Full Text] [Related]
14. Using phylochronology to reveal cryptic population histories: review and synthesis of 29 ancient DNA studies.
Ramakrishnan U; Hadly EA
Mol Ecol; 2009 Apr; 18(7):1310-30. PubMed ID: 19281471
[TBL] [Abstract][Full Text] [Related]
15. Bayesian semiparametric intensity estimation for inhomogeneous spatial point processes.
Yue YR; Loh JM
Biometrics; 2011 Sep; 67(3):937-46. PubMed ID: 21175553
[TBL] [Abstract][Full Text] [Related]
16. Exact limits of inference in coalescent models.
Johndrow JE; Palacios JA
Theor Popul Biol; 2019 Feb; 125():75-93. PubMed ID: 30571959
[TBL] [Abstract][Full Text] [Related]
17. Quantifying and Mitigating the Effect of Preferential Sampling on Phylodynamic Inference.
Karcher MD; Palacios JA; Bedford T; Suchard MA; Minin VN
PLoS Comput Biol; 2016 Mar; 12(3):e1004789. PubMed ID: 26938243
[TBL] [Abstract][Full Text] [Related]
18. Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Coalescent-based estimation of population parameters when the number of demes changes over time.
Ewing G; Rodrigo A;
Mol Biol Evol; 2006 May; 23(5):988-96. PubMed ID: 16495347
[TBL] [Abstract][Full Text] [Related]
19. Bayesian inference of population size history from multiple loci.
Heled J; Drummond AJ
BMC Evol Biol; 2008 Oct; 8():289. PubMed ID: 18947398
[TBL] [Abstract][Full Text] [Related]
20. Estimating variable effective population sizes from multiple genomes: a sequentially markov conditional sampling distribution approach.
Sheehan S; Harris K; Song YS
Genetics; 2013 Jul; 194(3):647-62. PubMed ID: 23608192
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
