464 related articles for article (PubMed ID: 23419374)
21. Identification of ubiquitin/ubiquitin-like protein modification from tandem mass spectra with various PTMs.
Kang C; Yi GS
BMC Bioinformatics; 2011 Dec; 12 Suppl 14(Suppl 14):S8. PubMed ID: 22373085
[TBL] [Abstract][Full Text] [Related]
22. PTMProphet: Fast and Accurate Mass Modification Localization for the Trans-Proteomic Pipeline.
Shteynberg DD; Deutsch EW; Campbell DS; Hoopmann MR; Kusebauch U; Lee D; Mendoza L; Midha MK; Sun Z; Whetton AD; Moritz RL
J Proteome Res; 2019 Dec; 18(12):4262-4272. PubMed ID: 31290668
[TBL] [Abstract][Full Text] [Related]
23. Analysis and Interpretation of Protein Post-Translational Modification Site Stoichiometry.
Prus G; Hoegl A; Weinert BT; Choudhary C
Trends Biochem Sci; 2019 Nov; 44(11):943-960. PubMed ID: 31296352
[TBL] [Abstract][Full Text] [Related]
24. Absolute quantitation of protein posttranslational modification isoform.
Yang Z; Li N
Methods Mol Biol; 2015; 1306():105-19. PubMed ID: 25930697
[TBL] [Abstract][Full Text] [Related]
25. Integrated data management and validation platform for phosphorylated tandem mass spectrometry data.
Lahesmaa-Korpinen AM; Carlson SM; White FM; Hautaniemi S
Proteomics; 2010 Oct; 10(19):3515-24. PubMed ID: 20827731
[TBL] [Abstract][Full Text] [Related]
26. The Methods Employed in Mass Spectrometric Analysis of Posttranslational Modifications (PTMs) and Protein-Protein Interactions (PPIs).
Yakubu RR; Nieves E; Weiss LM
Adv Exp Med Biol; 2019; 1140():169-198. PubMed ID: 31347048
[TBL] [Abstract][Full Text] [Related]
27. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
Matthiesen R; Trelle MB; Højrup P; Bunkenborg J; Jensen ON
J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
[TBL] [Abstract][Full Text] [Related]
28. A suffix tree approach to the interpretation of tandem mass spectra: applications to peptides of non-specific digestion and post-translational modifications.
Lu B; Chen T
Bioinformatics; 2003 Oct; 19 Suppl 2():ii113-21. PubMed ID: 14534180
[TBL] [Abstract][Full Text] [Related]
29. Prophossi: automating expert validation of phosphopeptide-spectrum matches from tandem mass spectrometry.
Martin DM; Nett IR; Vandermoere F; Barber JD; Morrice NA; Ferguson MA
Bioinformatics; 2010 Sep; 26(17):2153-9. PubMed ID: 20651112
[TBL] [Abstract][Full Text] [Related]
30. ISPTM: an iterative search algorithm for systematic identification of post-translational modifications from complex proteome mixtures.
Huang X; Huang L; Peng H; Guru A; Xue W; Hong SY; Liu M; Sharma S; Fu K; Caprez AP; Swanson DR; Zhang Z; Ding SJ
J Proteome Res; 2013 Sep; 12(9):3831-42. PubMed ID: 23919725
[TBL] [Abstract][Full Text] [Related]
31. PTM-ssMP: A Web Server for Predicting Different Types of Post-translational Modification Sites Using Novel Site-specific Modification Profile.
Liu Y; Wang M; Xi J; Luo F; Li A
Int J Biol Sci; 2018; 14(8):946-956. PubMed ID: 29989096
[TBL] [Abstract][Full Text] [Related]
32. Systematic analysis of non-structural protein features for the prediction of PTM function potential by artificial neural networks.
Dewhurst HM; Torres MP
PLoS One; 2017; 12(2):e0172572. PubMed ID: 28225828
[TBL] [Abstract][Full Text] [Related]
33. Identification of post-translational modifications by blind search of mass spectra.
Tsur D; Tanner S; Zandi E; Bafna V; Pevzner PA
Nat Biotechnol; 2005 Dec; 23(12):1562-7. PubMed ID: 16311586
[TBL] [Abstract][Full Text] [Related]
34. Functional analysis tools for post-translational modification: a post-translational modification database for analysis of proteins and metabolic pathways.
Cruz ER; Nguyen H; Nguyen T; Wallace IS
Plant J; 2019 Sep; 99(5):1003-1013. PubMed ID: 31034103
[TBL] [Abstract][Full Text] [Related]
35. dbPTM 2016: 10-year anniversary of a resource for post-translational modification of proteins.
Huang KY; Su MG; Kao HJ; Hsieh YC; Jhong JH; Cheng KH; Huang HD; Lee TY
Nucleic Acids Res; 2016 Jan; 44(D1):D435-46. PubMed ID: 26578568
[TBL] [Abstract][Full Text] [Related]
36. Global Post-Translational Modification Discovery.
Li Q; Shortreed MR; Wenger CD; Frey BL; Schaffer LV; Scalf M; Smith LM
J Proteome Res; 2017 Apr; 16(4):1383-1390. PubMed ID: 28248113
[TBL] [Abstract][Full Text] [Related]
37. Quokka: a comprehensive tool for rapid and accurate prediction of kinase family-specific phosphorylation sites in the human proteome.
Li F; Li C; Marquez-Lago TT; Leier A; Akutsu T; Purcell AW; Ian Smith A; Lithgow T; Daly RJ; Song J; Chou KC
Bioinformatics; 2018 Dec; 34(24):4223-4231. PubMed ID: 29947803
[TBL] [Abstract][Full Text] [Related]
38. Systematic characterization and prediction of post-translational modification cross-talk between proteins.
Huang R; Huang Y; Guo Y; Ji S; Lu M; Li T
Bioinformatics; 2019 Aug; 35(15):2626-2633. PubMed ID: 30590394
[TBL] [Abstract][Full Text] [Related]
39. BayesENproteomics: Bayesian Elastic Nets for Quantification of Peptidoforms in Complex Samples.
Mallikarjun V; Richardson SM; Swift J
J Proteome Res; 2020 Jun; 19(6):2167-2184. PubMed ID: 32319298
[TBL] [Abstract][Full Text] [Related]
40. Analytical utility of mass spectral binning in proteomic experiments by SPectral Immonium Ion Detection (SPIID).
Kelstrup CD; Frese C; Heck AJ; Olsen JV; Nielsen ML
Mol Cell Proteomics; 2014 Aug; 13(8):1914-24. PubMed ID: 24895383
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]