These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

182 related articles for article (PubMed ID: 23435498)

  • 21. Nucleosome positioning and nucleosome stacking: two faces of the same coin.
    Riposo J; Mozziconacci J
    Mol Biosyst; 2012 Apr; 8(4):1172-8. PubMed ID: 22266567
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Distinct modes of regulation by chromatin encoded through nucleosome positioning signals.
    Field Y; Kaplan N; Fondufe-Mittendorf Y; Moore IK; Sharon E; Lubling Y; Widom J; Segal E
    PLoS Comput Biol; 2008 Nov; 4(11):e1000216. PubMed ID: 18989395
    [TBL] [Abstract][Full Text] [Related]  

  • 23. The nucleosome position-encoding WW/SS sequence pattern is depleted in mammalian genes relative to other eukaryotes.
    Wright GM; Cui F
    Nucleic Acids Res; 2019 Sep; 47(15):7942-7954. PubMed ID: 31216031
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Hypomethylated domain-enriched DNA motifs prepattern the accessible nucleosome organization in teleosts.
    Nakamura R; Uno A; Kumagai M; Morishita S; Takeda H
    Epigenetics Chromatin; 2017 Sep; 10(1):44. PubMed ID: 28931432
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Nucleosomes shape DNA polymorphism and divergence.
    Langley SA; Karpen GH; Langley CH
    PLoS Genet; 2014 Jul; 10(7):e1004457. PubMed ID: 24991813
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Z curve theory-based analysis of the dynamic nature of nucleosome positioning in Saccharomyces cerevisiae.
    Wu X; Liu H; Liu H; Su J; Lv J; Cui Y; Wang F; Zhang Y
    Gene; 2013 Nov; 530(1):8-18. PubMed ID: 23958656
    [TBL] [Abstract][Full Text] [Related]  

  • 27. DNA physical properties determine nucleosome occupancy from yeast to fly.
    Miele V; Vaillant C; d'Aubenton-Carafa Y; Thermes C; Grange T
    Nucleic Acids Res; 2008 Jun; 36(11):3746-56. PubMed ID: 18487627
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Nucleosome positioning based on DNA sequence embedding and deep learning.
    Han GS; Li Q; Li Y
    BMC Genomics; 2022 Apr; 23(Suppl 1):301. PubMed ID: 35418074
    [TBL] [Abstract][Full Text] [Related]  

  • 29. A comparative evaluation on prediction methods of nucleosome positioning.
    Liu H; Zhang R; Xiong W; Guan J; Zhuang Z; Zhou S
    Brief Bioinform; 2014 Nov; 15(6):1014-27. PubMed ID: 24023366
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Painting a perspective on the landscape of nucleosome positioning.
    Johnson SM
    J Biomol Struct Dyn; 2010 Jun; 27(6):795-802. PubMed ID: 20232934
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Prediction of nucleosome rotational positioning in yeast and human genomes based on sequence-dependent DNA anisotropy.
    Cui F; Chen L; LoVerso PR; Zhurkin VB
    BMC Bioinformatics; 2014 Sep; 15(1):313. PubMed ID: 25244936
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Nucleosome positioning in yeasts: methods, maps, and mechanisms.
    Lieleg C; Krietenstein N; Walker M; Korber P
    Chromosoma; 2015 Jun; 124(2):131-51. PubMed ID: 25529773
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Predicting nucleosome positions in yeast: using the absolute frequency.
    Zhang Z; Zhang Y; Gutman I
    J Biomol Struct Dyn; 2012; 29(5):1081-8. PubMed ID: 22292961
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The molecular evolution of nucleosome positioning through sequence-dependent deformation of the DNA polymer.
    Babbitt GA; Tolstorukov MY; Kim Y
    J Biomol Struct Dyn; 2010 Jun; 27(6):765-80. PubMed ID: 20232932
    [TBL] [Abstract][Full Text] [Related]  

  • 35. The DNA-encoded nucleosome organization of a eukaryotic genome.
    Kaplan N; Moore IK; Fondufe-Mittendorf Y; Gossett AJ; Tillo D; Field Y; LeProust EM; Hughes TR; Lieb JD; Widom J; Segal E
    Nature; 2009 Mar; 458(7236):362-6. PubMed ID: 19092803
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Calculation of nucleosomal DNA deformation energy: its implication for nucleosome positioning.
    Wang JY; Wang J; Liu G
    Chromosome Res; 2012 Oct; 20(7):889-902. PubMed ID: 23247720
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Using deformation energy to analyze nucleosome positioning in genomes.
    Chen W; Feng P; Ding H; Lin H; Chou KC
    Genomics; 2016 Mar; 107(2-3):69-75. PubMed ID: 26724497
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions.
    Schep AN; Buenrostro JD; Denny SK; Schwartz K; Sherlock G; Greenleaf WJ
    Genome Res; 2015 Nov; 25(11):1757-70. PubMed ID: 26314830
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Nucleosome structure and repair of N-methylpurines in the GAL1-10 genes of Saccharomyces cerevisiae.
    Li S; Smerdon MJ
    J Biol Chem; 2002 Nov; 277(47):44651-9. PubMed ID: 12244104
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Sequence signatures of nucleosome positioning in Caenorhabditis elegans.
    Chen K; Wang L; Yang M; Liu J; Xin C; Hu S; Yu J
    Genomics Proteomics Bioinformatics; 2010 Jun; 8(2):92-102. PubMed ID: 20691394
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.