These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

74 related articles for article (PubMed ID: 23464136)

  • 21. tdc.msm: an R library for the analysis of multi-state survival data.
    Meira-Machado L; Cadarso-Suárez C; de Uña-Alvarez J
    Comput Methods Programs Biomed; 2007 May; 86(2):131-40. PubMed ID: 17350136
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Building Markov State Models for Periodically Driven Non-Equilibrium Systems.
    Wang H; Schütte C
    J Chem Theory Comput; 2015 Apr; 11(4):1819-31. PubMed ID: 26889513
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Accurate modeling of sequential decay in clusters over long time scales: Insights from phase space theory.
    Calvo F; Parneix P
    J Chem Phys; 2007 Jan; 126(3):034309. PubMed ID: 17249873
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Simulation of gas adsorption on a surface and in slit pores with grand canonical and canonical kinetic Monte Carlo methods.
    Ustinov EA; Do DD
    Phys Chem Chem Phys; 2012 Aug; 14(31):11112-8. PubMed ID: 22767023
    [TBL] [Abstract][Full Text] [Related]  

  • 25. An equation-free probabilistic steady-state approximation: dynamic application to the stochastic simulation of biochemical reaction networks.
    Salis H; Kaznessis YN
    J Chem Phys; 2005 Dec; 123(21):214106. PubMed ID: 16356038
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Markov state models based on milestoning.
    Schütte C; Noé F; Lu J; Sarich M; Vanden-Eijnden E
    J Chem Phys; 2011 May; 134(20):204105. PubMed ID: 21639422
    [TBL] [Abstract][Full Text] [Related]  

  • 27. A critical perspective on Markov state model treatments of protein-protein association using coarse-grained simulations.
    He Z; Paul F; Roux B
    J Chem Phys; 2021 Feb; 154(8):084101. PubMed ID: 33639768
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A lattice protein with an amyloidogenic latent state: stability and folding kinetics.
    Palyanov AY; Krivov SV; Karplus M; Chekmarev SF
    J Phys Chem B; 2007 Mar; 111(10):2675-87. PubMed ID: 17315918
    [TBL] [Abstract][Full Text] [Related]  

  • 29. A Bayesian method for construction of Markov models to describe dynamics on various time-scales.
    Rains EK; Andersen HC
    J Chem Phys; 2010 Oct; 133(14):144113. PubMed ID: 20949993
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Lumping analysis for the prediction of long-time dynamics: from monomolecular reaction systems to inherent structure dynamics of glassy materials.
    Lempesis N; Tsalikis DG; Boulougouris GC; Theodorou DN
    J Chem Phys; 2011 Nov; 135(20):204507. PubMed ID: 22128943
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Error analysis and efficient sampling in Markovian state models for molecular dynamics.
    Singhal N; Pande VS
    J Chem Phys; 2005 Nov; 123(20):204909. PubMed ID: 16351319
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Ultrametricity in Protein Folding Dynamics.
    Scalco R; Caflisch A
    J Chem Theory Comput; 2012 May; 8(5):1580-8. PubMed ID: 26593651
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Elucidation of the conformational dynamics of multi-body systems by construction of Markov state models.
    Zhu L; Sheong FK; Zeng X; Huang X
    Phys Chem Chem Phys; 2016 Nov; 18(44):30228-30235. PubMed ID: 27314275
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Markov chain Monte Carlo fitting of single-channel data from inositol trisphosphate receptors.
    Gin E; Falcke M; Wagner LE; Yule DI; Sneyd J
    J Theor Biol; 2009 Apr; 257(3):460-74. PubMed ID: 19168073
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Calculating rate constants and committor probabilities for transition networks by graph transformation.
    Wales DJ
    J Chem Phys; 2009 May; 130(20):204111. PubMed ID: 19485441
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Kinetic Monte Carlo simulations of surface growth during plasma deposition of silicon thin films.
    Pandey SC; Singh T; Maroudas D
    J Chem Phys; 2009 Jul; 131(3):034503. PubMed ID: 19624205
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Adaptive Markov state model estimation using short reseeding trajectories.
    Wan H; Voelz VA
    J Chem Phys; 2020 Jan; 152(2):024103. PubMed ID: 31941308
    [TBL] [Abstract][Full Text] [Related]  

  • 38. MSM/RD: Coupling Markov state models of molecular kinetics with reaction-diffusion simulations.
    Dibak M; Del Razo MJ; De Sancho D; Schütte C; Noé F
    J Chem Phys; 2018 Jun; 148(21):214107. PubMed ID: 29884049
    [TBL] [Abstract][Full Text] [Related]  

  • 39. An ab initio Rice-Ramsperger-Kassel-Marcus/master equation investigation of SiH(4) decomposition kinetics using a kinetic Monte Carlo approach.
    Barbato A; Seghi C; Cavallotti C
    J Chem Phys; 2009 Feb; 130(7):074108. PubMed ID: 19239285
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Comparison of kinetic Monte Carlo and molecular dynamics simulations of diffusion in a model glass former.
    Middleton TF; Wales DJ
    J Chem Phys; 2004 May; 120(17):8134-43. PubMed ID: 15267733
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 4.