245 related articles for article (PubMed ID: 23468878)
21. Template selection and refinement considerations for modelling aminergic GPCR-ligand complexes.
Urmi KF; Finch AM; Griffith R
J Mol Graph Model; 2017 Sep; 76():488-503. PubMed ID: 28818718
[TBL] [Abstract][Full Text] [Related]
22. Successful prediction of the intra- and extracellular loops of four G-protein-coupled receptors.
Goldfeld DA; Zhu K; Beuming T; Friesner RA
Proc Natl Acad Sci U S A; 2011 May; 108(20):8275-80. PubMed ID: 21536915
[TBL] [Abstract][Full Text] [Related]
23. FoldGPCR: structure prediction protocol for the transmembrane domain of G protein-coupled receptors from class A.
Michino M; Chen J; Stevens RC; Brooks CL
Proteins; 2010 Aug; 78(10):2189-201. PubMed ID: 20544957
[TBL] [Abstract][Full Text] [Related]
24. Key issues in the computational simulation of GPCR function: representation of loop domains.
Mehler EL; Periole X; Hassan SA; Weinstein H
J Comput Aided Mol Des; 2002 Nov; 16(11):841-53. PubMed ID: 12825797
[TBL] [Abstract][Full Text] [Related]
25. Current assessment of docking into GPCR crystal structures and homology models: successes, challenges, and guidelines.
Beuming T; Sherman W
J Chem Inf Model; 2012 Dec; 52(12):3263-77. PubMed ID: 23121495
[TBL] [Abstract][Full Text] [Related]
26. Prediction of Conformation Specific Thermostabilizing Mutations for Class A G Protein-Coupled Receptors.
Jana S; Ghosh S; Muk S; Levy B; Vaidehi N
J Chem Inf Model; 2019 Sep; 59(9):3744-3754. PubMed ID: 31408606
[TBL] [Abstract][Full Text] [Related]
27. Agonist-induced conformational changes in bovine rhodopsin: insight into activation of G-protein-coupled receptors.
Bhattacharya S; Hall SE; Vaidehi N
J Mol Biol; 2008 Oct; 382(2):539-55. PubMed ID: 18638482
[TBL] [Abstract][Full Text] [Related]
28. Efficiency of Homology Modeling Assisted Molecular Docking in G-protein Coupled Receptors.
Bhunia SS; Saxena AK
Curr Top Med Chem; 2021; 21(4):269-294. PubMed ID: 32901584
[TBL] [Abstract][Full Text] [Related]
29. Evaluation of homology modeling of G-protein-coupled receptors in light of the A(2A) adenosine receptor crystallographic structure.
Ivanov AA; Barak D; Jacobson KA
J Med Chem; 2009 May; 52(10):3284-92. PubMed ID: 19402631
[TBL] [Abstract][Full Text] [Related]
30. G protein-coupled receptors--recent advances.
Latek D; Modzelewska A; Trzaskowski B; Palczewski K; Filipek S
Acta Biochim Pol; 2012; 59(4):515-29. PubMed ID: 23251911
[TBL] [Abstract][Full Text] [Related]
31. Modelling the structures of G protein-coupled receptors aided by three-dimensional validation.
Dastmalchi S; Church WB; Morris MB
BMC Bioinformatics; 2008; 9 Suppl 1(Suppl 1):S14. PubMed ID: 18315845
[TBL] [Abstract][Full Text] [Related]
32. Crystal structure of oligomeric β1-adrenergic G protein-coupled receptors in ligand-free basal state.
Huang J; Chen S; Zhang JJ; Huang XY
Nat Struct Mol Biol; 2013 Apr; 20(4):419-25. PubMed ID: 23435379
[TBL] [Abstract][Full Text] [Related]
33. Modeling the possible conformations of the extracellular loops in G-protein-coupled receptors.
Nikiforovich GV; Taylor CM; Marshall GR; Baranski TJ
Proteins; 2010 Feb; 78(2):271-85. PubMed ID: 19731375
[TBL] [Abstract][Full Text] [Related]
34. Homology modeling of class a G protein-coupled receptors.
Costanzi S
Methods Mol Biol; 2012; 857():259-79. PubMed ID: 22323225
[TBL] [Abstract][Full Text] [Related]
35. Activation of G-protein-coupled receptors correlates with the formation of a continuous internal water pathway.
Yuan S; Filipek S; Palczewski K; Vogel H
Nat Commun; 2014 Sep; 5():4733. PubMed ID: 25203160
[TBL] [Abstract][Full Text] [Related]
36. Structure-Based Prediction of G-Protein-Coupled Receptor Ligand Function: A β-Adrenoceptor Case Study.
Kooistra AJ; Leurs R; de Esch IJ; de Graaf C
J Chem Inf Model; 2015 May; 55(5):1045-61. PubMed ID: 25848966
[TBL] [Abstract][Full Text] [Related]
37. Molecular modeling of A1 and A2A adenosine receptors: comparison of rhodopsin- and beta2-adrenergic-based homology models through the docking studies.
Yuzlenko O; Kieć-Kononowicz K
J Comput Chem; 2009 Jan; 30(1):14-32. PubMed ID: 18496794
[TBL] [Abstract][Full Text] [Related]
38. First principles predictions of the structure and function of g-protein-coupled receptors: validation for bovine rhodopsin.
Trabanino RJ; Hall SE; Vaidehi N; Floriano WB; Kam VW; Goddard WA
Biophys J; 2004 Apr; 86(4):1904-21. PubMed ID: 15041637
[TBL] [Abstract][Full Text] [Related]
39. Reliability of Docking-Based Virtual Screening for GPCR Ligands with Homology Modeled Structures: A Case Study of the Angiotensin II Type I Receptor.
Chen H; Fu W; Wang Z; Wang X; Lei T; Zhu F; Li D; Chang S; Xu L; Hou T
ACS Chem Neurosci; 2019 Jan; 10(1):677-689. PubMed ID: 30265513
[TBL] [Abstract][Full Text] [Related]
40. GRIP: a server for predicting interfaces for GPCR oligomerization.
Nemoto W; Fukui K; Toh H
J Recept Signal Transduct Res; 2009 Dec; 29(6):312-7. PubMed ID: 19888901
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
