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2. Improved orthology inference with Hieranoid 2. Kaduk M; Sonnhammer E Bioinformatics; 2017 Apr; 33(8):1154-1159. PubMed ID: 28096085 [TBL] [Abstract][Full Text] [Related]
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10. Computational methods for Gene Orthology inference. Kristensen DM; Wolf YI; Mushegian AR; Koonin EV Brief Bioinform; 2011 Sep; 12(5):379-91. PubMed ID: 21690100 [TBL] [Abstract][Full Text] [Related]
11. A meta-approach for improving the prediction and the functional annotation of ortholog groups. Pereira C; Denise A; Lespinet O BMC Genomics; 2014; 15 Suppl 6(Suppl 6):S16. PubMed ID: 25573073 [TBL] [Abstract][Full Text] [Related]
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16. morFeus: a web-based program to detect remotely conserved orthologs using symmetrical best hits and orthology network scoring. Wagner I; Volkmer M; Sharan M; Villaveces JM; Oswald F; Surendranath V; Habermann BH BMC Bioinformatics; 2014 Aug; 15(1):263. PubMed ID: 25096057 [TBL] [Abstract][Full Text] [Related]
17. Assessment of phylogenomic and orthology approaches for phylogenetic inference. Dutilh BE; van Noort V; van der Heijden RT; Boekhout T; Snel B; Huynen MA Bioinformatics; 2007 Apr; 23(7):815-24. PubMed ID: 17237036 [TBL] [Abstract][Full Text] [Related]
18. A phylogeny-based benchmarking test for orthology inference reveals the limitations of function-based validation. Trachana K; Forslund K; Larsson T; Powell S; Doerks T; von Mering C; Bork P PLoS One; 2014; 9(11):e111122. PubMed ID: 25369365 [TBL] [Abstract][Full Text] [Related]
19. Primary orthologs from local sequence context. Gao K; Miller J BMC Bioinformatics; 2020 Feb; 21(1):48. PubMed ID: 32028880 [TBL] [Abstract][Full Text] [Related]
20. OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software. Kriventseva EV; Tegenfeldt F; Petty TJ; Waterhouse RM; Simão FA; Pozdnyakov IA; Ioannidis P; Zdobnov EM Nucleic Acids Res; 2015 Jan; 43(Database issue):D250-6. PubMed ID: 25428351 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]