BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

239 related articles for article (PubMed ID: 23506098)

  • 1. Characterizing the protonation state of cytosine in transient G·C Hoogsteen base pairs in duplex DNA.
    Nikolova EN; Goh GB; Brooks CL; Al-Hashimi HM
    J Am Chem Soc; 2013 May; 135(18):6766-9. PubMed ID: 23506098
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Direct evidence for (G)O6···H
    Rangadurai A; Kremser J; Shi H; Kreutz C; Al-Hashimi HM
    J Magn Reson; 2019 Nov; 308():106589. PubMed ID: 31539864
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structure of the 1,N2-ethenodeoxyguanosine adduct opposite cytosine in duplex DNA: Hoogsteen base pairing at pH 5.2.
    Shanmugam G; Kozekov ID; Guengerich FP; Rizzo CJ; Stone MP
    Chem Res Toxicol; 2008 Sep; 21(9):1795-805. PubMed ID: 18693701
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Characterizing Watson-Crick versus Hoogsteen Base Pairing in a DNA-Protein Complex Using Nuclear Magnetic Resonance and Site-Specifically
    Zhou H; Sathyamoorthy B; Stelling A; Xu Y; Xue Y; Pigli YZ; Case DA; Rice PA; Al-Hashimi HM
    Biochemistry; 2019 Apr; 58(15):1963-1974. PubMed ID: 30950607
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Free-Energy Landscape of a pH-Modulated G·C Base Pair Transition from Watson-Crick to Hoogsteen State in Duplex DNA.
    Kim H; Yang C; Pak Y
    J Chem Theory Comput; 2021 Apr; 17(4):2556-2565. PubMed ID: 33689343
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A historical account of Hoogsteen base-pairs in duplex DNA.
    Nikolova EN; Zhou H; Gottardo FL; Alvey HS; Kimsey IJ; Al-Hashimi HM
    Biopolymers; 2013 Dec; 99(12):955-68. PubMed ID: 23818176
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Modulation of Hoogsteen dynamics on DNA recognition.
    Xu Y; McSally J; Andricioaei I; Al-Hashimi HM
    Nat Commun; 2018 Apr; 9(1):1473. PubMed ID: 29662229
    [TBL] [Abstract][Full Text] [Related]  

  • 8. 1H NMR of an oligodeoxynucleotide containing a propanodeoxyguanosine adduct positioned in a (CG)3 frameshift hotspot of Salmonella typhimurium hisD3052: Hoogsteen base-pairing at pH 5.8.
    Singh US; Moe JG; Reddy GR; Weisenseel JP; Marnett LJ; Stone MP
    Chem Res Toxicol; 1993; 6(6):825-36. PubMed ID: 8117922
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Infrared Spectroscopic Observation of a G-C
    Stelling AL; Liu AY; Zeng W; Salinas R; Schumacher MA; Al-Hashimi HM
    Angew Chem Int Ed Engl; 2019 Aug; 58(35):12010-12013. PubMed ID: 31268220
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Atomic structures of excited state A-T Hoogsteen base pairs in duplex DNA by combining NMR relaxation dispersion, mutagenesis, and chemical shift calculations.
    Shi H; Clay MC; Rangadurai A; Sathyamoorthy B; Case DA; Al-Hashimi HM
    J Biomol NMR; 2018 Apr; 70(4):229-244. PubMed ID: 29675775
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Transient Hoogsteen base pairs in canonical duplex DNA.
    Nikolova EN; Kim E; Wise AA; O'Brien PJ; Andricioaei I; Al-Hashimi HM
    Nature; 2011 Feb; 470(7335):498-502. PubMed ID: 21270796
    [TBL] [Abstract][Full Text] [Related]  

  • 12. [Structural and energetic properties of the four configurations of the A.T and G.C DNA base pairs].
    Brovarets' OO
    Ukr Biokhim Zh (1999); 2013; 85(4):104-10. PubMed ID: 24319980
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Guanine to inosine substitution leads to large increases in the population of a transient G·C Hoogsteen base pair.
    Nikolova EN; Stull F; Al-Hashimi HM
    Biochemistry; 2014 Nov; 53(46):7145-7. PubMed ID: 25339065
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Robust IR-based detection of stable and fractionally populated G-C
    Stelling AL; Xu Y; Zhou H; Choi SH; Clay MC; Merriman DK; Al-Hashimi HM
    FEBS Lett; 2017 Jun; 591(12):1770-1784. PubMed ID: 28524232
    [TBL] [Abstract][Full Text] [Related]  

  • 15. pH and cation effects on the properties of parallel pyrimidine motif DNA triplexes.
    Sugimoto N; Wu P; Hara H; Kawamoto Y
    Biochemistry; 2001 Aug; 40(31):9396-405. PubMed ID: 11478909
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A Hoogsteen base pair embedded in undistorted B-DNA.
    Aishima J; Gitti RK; Noah JE; Gan HH; Schlick T; Wolberger C
    Nucleic Acids Res; 2002 Dec; 30(23):5244-52. PubMed ID: 12466549
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Hydrogen bonding in duplex DNA probed by DNP enhanced solid-state NMR N-H bond length measurements.
    Bhai L; Thomas JK; Conroy DW; Xu Y; Al-Hashimi HM; Jaroniec CP
    Front Mol Biosci; 2023; 10():1286172. PubMed ID: 38111464
    [TBL] [Abstract][Full Text] [Related]  

  • 18. 5-Carboxylcytosine and Cytosine Protonation Distinctly Alter the Stability and Dehybridization Dynamics of the DNA Duplex.
    Ashwood B; Sanstead PJ; Dai Q; He C; Tokmakoff A
    J Phys Chem B; 2020 Jan; 124(4):627-640. PubMed ID: 31873021
    [TBL] [Abstract][Full Text] [Related]  

  • 19. [Under what conditions does G.C Watson-Crick DNA base pair acquire all four configurations characteristic for A.T Watson-Crick DNA base pair?].
    Brovarets' OO
    Ukr Biokhim Zh (1999); 2013; 85(4):98-103. PubMed ID: 24319979
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Proton Transfer Accounting for Anomalous Collision-Induced Dissociation of Proton-Bound Hoogsteen Base Pair of Cytosine and Guanine.
    Park JJ; Lee CS; Han SY
    J Am Soc Mass Spectrom; 2018 Dec; 29(12):2368-2379. PubMed ID: 30215166
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.