BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

310 related articles for article (PubMed ID: 23510103)

  • 1. Structural refinement from restrained-ensemble simulations based on EPR/DEER data: application to T4 lysozyme.
    Islam SM; Stein RA; McHaourab HS; Roux B
    J Phys Chem B; 2013 May; 117(17):4740-54. PubMed ID: 23510103
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Restrained-ensemble molecular dynamics simulations based on distance histograms from double electron-electron resonance spectroscopy.
    Roux B; Islam SM
    J Phys Chem B; 2013 May; 117(17):4733-9. PubMed ID: 23510121
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Simulating the distance distribution between spin-labels attached to proteins.
    Islam SM; Roux B
    J Phys Chem B; 2015 Mar; 119(10):3901-11. PubMed ID: 25645890
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Study of Protein Dynamics under Nanoconfinement by Spin-Label ESR: A Case of T4 Lysozyme Protein.
    Chang KJ; Kuo YH; Chiang YW
    J Phys Chem B; 2017 May; 121(17):4355-4363. PubMed ID: 28409932
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Orthogonal spin labeling and Gd(III)-nitroxide distance measurements on bacteriophage T4-lysozyme.
    Garbuio L; Bordignon E; Brooks EK; Hubbell WL; Jeschke G; Yulikov M
    J Phys Chem B; 2013 Mar; 117(11):3145-53. PubMed ID: 23442004
    [TBL] [Abstract][Full Text] [Related]  

  • 6. RosettaEPR: rotamer library for spin label structure and dynamics.
    Alexander NS; Stein RA; Koteiche HA; Kaufmann KW; McHaourab HS; Meiler J
    PLoS One; 2013; 8(9):e72851. PubMed ID: 24039810
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Effect of freezing conditions on distances and their distributions derived from Double Electron Electron Resonance (DEER): a study of doubly-spin-labeled T4 lysozyme.
    Georgieva ER; Roy AS; Grigoryants VM; Borbat PP; Earle KA; Scholes CP; Freed JH
    J Magn Reson; 2012 Mar; 216():69-77. PubMed ID: 22341208
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Protein structure determination using long-distance constraints from double-quantum coherence ESR: study of T4 lysozyme.
    Borbat PP; McHaourab HS; Freed JH
    J Am Chem Soc; 2002 May; 124(19):5304-14. PubMed ID: 11996571
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Combining EPR spectroscopy and X-ray crystallography to elucidate the structure and dynamics of conformationally constrained spin labels in T4 lysozyme single crystals.
    Consentius P; Gohlke U; Loll B; Alings C; Heinemann U; Wahl MC; Risse T
    Phys Chem Chem Phys; 2017 Aug; 19(31):20723-20734. PubMed ID: 28740983
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A rigid disulfide-linked nitroxide side chain simplifies the quantitative analysis of PRE data.
    Fawzi NL; Fleissner MR; Anthis NJ; Kálai T; Hideg K; Hubbell WL; Clore GM
    J Biomol NMR; 2011 Sep; 51(1-2):105-14. PubMed ID: 21947919
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CHARMM-GUI DEER facilitator for spin-pair distance distribution calculations and preparation of restrained-ensemble molecular dynamics simulations.
    Qi Y; Lee J; Cheng X; Shen R; Islam SM; Roux B; Im W
    J Comput Chem; 2020 Feb; 41(5):415-420. PubMed ID: 31329318
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Structural Characterization of Biomolecules through Atomistic Simulations Guided by DEER Measurements.
    Marinelli F; Fiorin G
    Structure; 2019 Feb; 27(2):359-370.e12. PubMed ID: 30528595
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Methodology for rigorous modeling of protein conformational changes by Rosetta using DEER distance restraints.
    Del Alamo D; Jagessar KL; Meiler J; Mchaourab HS
    PLoS Comput Biol; 2021 Jun; 17(6):e1009107. PubMed ID: 34133419
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Long-range distance measurements in proteins at physiological temperatures using saturation recovery EPR spectroscopy.
    Yang Z; Jiménez-Osés G; López CJ; Bridges MD; Houk KN; Hubbell WL
    J Am Chem Soc; 2014 Oct; 136(43):15356-65. PubMed ID: 25290172
    [TBL] [Abstract][Full Text] [Related]  

  • 15. EPR relaxation-enhancement-based distance measurements on orthogonally spin-labeled T4-lysozyme.
    Razzaghi S; Brooks EK; Bordignon E; Hubbell WL; Yulikov M; Jeschke G
    Chembiochem; 2013 Sep; 14(14):1883-90. PubMed ID: 23775845
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Motion of spin-labeled side chains in T4 lysozyme. Correlation with protein structure and dynamics.
    Mchaourab HS; Lietzow MA; Hideg K; Hubbell WL
    Biochemistry; 1996 Jun; 35(24):7692-704. PubMed ID: 8672470
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Crystal structures of spin labeled T4 lysozyme mutants: implications for the interpretation of EPR spectra in terms of structure.
    Langen R; Oh KJ; Cascio D; Hubbell WL
    Biochemistry; 2000 Jul; 39(29):8396-405. PubMed ID: 10913245
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Solvent interactions and protein dynamics in spin-labeled T4 lysozyme.
    Stoica I
    J Biomol Struct Dyn; 2004 Jun; 21(6):745-60. PubMed ID: 15106997
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Multifrequency electron spin resonance spectra of a spin-labeled protein calculated from molecular dynamics simulations.
    Sezer D; Freed JH; Roux B
    J Am Chem Soc; 2009 Feb; 131(7):2597-605. PubMed ID: 19191603
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Structural origins of nitroxide side chain dynamics on membrane protein α-helical sites.
    Kroncke BM; Horanyi PS; Columbus L
    Biochemistry; 2010 Nov; 49(47):10045-60. PubMed ID: 20964375
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.