These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Secondary structure formation of homopolymeric single-stranded nucleic acids including force and loop entropy: implications for DNA hybridization. Einert TR; Orland H; Netz RR Eur Phys J E Soft Matter; 2011 Jun; 34(6):55. PubMed ID: 21626368 [TBL] [Abstract][Full Text] [Related]
3. Single-molecule study of the DNA denaturation phase transition in the force-torsion space. Salerno D; Tempestini A; Mai I; Brogioli D; Ziano R; Cassina V; Mantegazza F Phys Rev Lett; 2012 Sep; 109(11):118303. PubMed ID: 23005686 [TBL] [Abstract][Full Text] [Related]
5. Different pulling modes in DNA overstretching: a theoretical analysis. Marenduzzo D; Orlandini E; Seno F; Trovato A Phys Rev E Stat Nonlin Soft Matter Phys; 2010 May; 81(5 Pt 1):051926. PubMed ID: 20866280 [TBL] [Abstract][Full Text] [Related]
6. B-S transition in short oligonucleotides. Morfill J; Kühner F; Blank K; Lugmaier RA; Sedlmair J; Gaub HE Biophys J; 2007 Oct; 93(7):2400-9. PubMed ID: 17557787 [TBL] [Abstract][Full Text] [Related]
7. Mapping the phase diagram of single DNA molecule force-induced melting in the presence of ethidium. Vladescu ID; McCauley MJ; Rouzina I; Williams MC Phys Rev Lett; 2005 Oct; 95(15):158102. PubMed ID: 16241765 [TBL] [Abstract][Full Text] [Related]
8. The nature of the force-induced conformation transition of dsDNA studied by using single molecule force spectroscopy. Liu N; Bu T; Song Y; Zhang W; Li J; Zhang W; Shen J; Li H Langmuir; 2010 Jun; 26(12):9491-6. PubMed ID: 20178341 [TBL] [Abstract][Full Text] [Related]
9. Analysis of RNA flexibility by scanning force spectroscopy. Bonin M; Zhu R; Klaue Y; Oberstrass J; Oesterschulze E; Nellen W Nucleic Acids Res; 2002 Aug; 30(16):e81. PubMed ID: 12177309 [TBL] [Abstract][Full Text] [Related]
10. Structural transitions in DNA driven by external force and torque. Sarkar A; Léger JF; Chatenay D; Marko JF Phys Rev E Stat Nonlin Soft Matter Phys; 2001 May; 63(5 Pt 1):051903. PubMed ID: 11414929 [TBL] [Abstract][Full Text] [Related]
11. Secondary structure of double-stranded DNA under stretching: elucidation of the stretched form. Maaloum M; Beker AF; Muller P Phys Rev E Stat Nonlin Soft Matter Phys; 2011 Mar; 83(3 Pt 1):031903. PubMed ID: 21517521 [TBL] [Abstract][Full Text] [Related]
12. Equilibrium melting probabilities of a DNA molecule with a defect: An exact solution of the Poland-Scheraga model. Genthon A; Dvirnas A; Ambjörnsson T J Chem Phys; 2023 Oct; 159(14):. PubMed ID: 37815110 [TBL] [Abstract][Full Text] [Related]
13. DNA unzipping phase diagram calculated via replica theory. Roland CB; Hatch KA; Prentiss M; Shakhnovich EI Phys Rev E Stat Nonlin Soft Matter Phys; 2009 May; 79(5 Pt 1):051923. PubMed ID: 19518496 [TBL] [Abstract][Full Text] [Related]
14. Wonderful world of single biopolymer thermodynamics. Comment on "Biophysical characterization of DNA binding from single molecule force measurements" by K.R. Chaurasiya et al. Metzler R Phys Life Rev; 2010 Sep; 7(3):355-7; discussion 358-61. PubMed ID: 20667796 [No Abstract] [Full Text] [Related]
15. DNA overstretching in the presence of glyoxal: structural evidence of force-induced DNA melting. Shokri L; McCauley MJ; Rouzina I; Williams MC Biophys J; 2008 Aug; 95(3):1248-55. PubMed ID: 18424499 [TBL] [Abstract][Full Text] [Related]
16. Unravelling the structural plasticity of stretched DNA under torsional constraint. King GA; Peterman EJ; Wuite GJ Nat Commun; 2016 Jun; 7():11810. PubMed ID: 27263853 [TBL] [Abstract][Full Text] [Related]
17. Tension induces a base-paired overstretched DNA conformation. Bosaeus N; El-Sagheer AH; Brown T; Smith SB; Akerman B; Bustamante C; Nordén B Proc Natl Acad Sci U S A; 2012 Sep; 109(38):15179-84. PubMed ID: 22949705 [TBL] [Abstract][Full Text] [Related]
18. A three-state model with loop entropy for the overstretching transition of DNA. Einert TR; Staple DB; Kreuzer HJ; Netz RR Biophys J; 2010 Jul; 99(2):578-87. PubMed ID: 20643077 [TBL] [Abstract][Full Text] [Related]
19. Salt dependence of the elasticity and overstretching transition of single DNA molecules. Wenner JR; Williams MC; Rouzina I; Bloomfield VA Biophys J; 2002 Jun; 82(6):3160-9. PubMed ID: 12023240 [TBL] [Abstract][Full Text] [Related]
20. Unraveling the structure of DNA during overstretching by using multicolor, single-molecule fluorescence imaging. van Mameren J; Gross P; Farge G; Hooijman P; Modesti M; Falkenberg M; Wuite GJ; Peterman EJ Proc Natl Acad Sci U S A; 2009 Oct; 106(43):18231-6. PubMed ID: 19841258 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]