These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
138 related articles for article (PubMed ID: 23531303)
1. AMBIENT: Active Modules for Bipartite Networks--using high-throughput transcriptomic data to dissect metabolic response. Bryant WA; Sternberg MJ; Pinney JW BMC Syst Biol; 2013 Mar; 7():26. PubMed ID: 23531303 [TBL] [Abstract][Full Text] [Related]
2. Identification of functional modules using network topology and high-throughput data. Ulitsky I; Shamir R BMC Syst Biol; 2007 Jan; 1():8. PubMed ID: 17408515 [TBL] [Abstract][Full Text] [Related]
3. Functional integration of a metabolic network model and expression data without arbitrary thresholding. Jensen PA; Papin JA Bioinformatics; 2011 Feb; 27(4):541-7. PubMed ID: 21172910 [TBL] [Abstract][Full Text] [Related]
4. Genome-Scale Ando D; García Martín H Methods Mol Biol; 2019; 1859():317-345. PubMed ID: 30421239 [TBL] [Abstract][Full Text] [Related]
13. Deciphering the response of Mycobacterium smegmatis to nitrogen stress using bipartite active modules. Williams KJ; Bryant WA; Jenkins VA; Barton GR; Witney AA; Pinney JW; Robertson BD BMC Genomics; 2013 Jul; 14():436. PubMed ID: 23819599 [TBL] [Abstract][Full Text] [Related]
14. Detecting drug targets with minimum side effects in metabolic networks. Li Z; Wang RS; Zhang XS; Chen L IET Syst Biol; 2009 Nov; 3(6):523-33. PubMed ID: 19947778 [TBL] [Abstract][Full Text] [Related]
15. The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networks. Swainston N; Smallbone K; Mendes P; Kell D; Paton N J Integr Bioinform; 2011 Nov; 8(2):186. PubMed ID: 22095399 [TBL] [Abstract][Full Text] [Related]
16. Systems biology approaches and pathway tools for investigating cardiovascular disease. Wheelock CE; Wheelock AM; Kawashima S; Diez D; Kanehisa M; van Erk M; Kleemann R; Haeggström JZ; Goto S Mol Biosyst; 2009 Jun; 5(6):588-602. PubMed ID: 19462016 [TBL] [Abstract][Full Text] [Related]
17. Pathway Activity Profiling (PAPi): from the metabolite profile to the metabolic pathway activity. Aggio RB; Ruggiero K; Villas-Bôas SG Bioinformatics; 2010 Dec; 26(23):2969-76. PubMed ID: 20929912 [TBL] [Abstract][Full Text] [Related]
18. Reduction techniques for network validation in systems biology. Ackermann J; Einloft J; Nöthen J; Koch I J Theor Biol; 2012 Dec; 315():71-80. PubMed ID: 22982289 [TBL] [Abstract][Full Text] [Related]
19. lumpGEM: Systematic generation of subnetworks and elementally balanced lumped reactions for the biosynthesis of target metabolites. Ataman M; Hatzimanikatis V PLoS Comput Biol; 2017 Jul; 13(7):e1005513. PubMed ID: 28727789 [TBL] [Abstract][Full Text] [Related]