285 related articles for article (PubMed ID: 23541739)
1. Predicting long non-coding RNAs using RNA sequencing.
Ilott NE; Ponting CP
Methods; 2013 Sep; 63(1):50-9. PubMed ID: 23541739
[TBL] [Abstract][Full Text] [Related]
2. Analysis RNA-seq and Noncoding RNA.
Arrigoni A; Ranzani V; Rossetti G; Panzeri I; Abrignani S; Bonnal RJ; Pagani M
Methods Mol Biol; 2016; 1480():125-35. PubMed ID: 27659980
[TBL] [Abstract][Full Text] [Related]
3. Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster.
Chen MJ; Chen LK; Lai YS; Lin YY; Wu DC; Tung YA; Liu KY; Shih HT; Chen YJ; Lin YL; Ma LT; Huang JL; Wu PC; Hong MY; Chu FH; Wu JT; Li WH; Chen CY
BMC Genomics; 2016 Mar; 17():220. PubMed ID: 26969372
[TBL] [Abstract][Full Text] [Related]
4. Nuclear RNA sequencing of the mouse erythroid cell transcriptome.
Mitchell JA; Clay I; Umlauf D; Chen CY; Moir CA; Eskiw CH; Schoenfelder S; Chakalova L; Nagano T; Fraser P
PLoS One; 2012; 7(11):e49274. PubMed ID: 23209567
[TBL] [Abstract][Full Text] [Related]
5. Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study.
Sun L; Zhang Z; Bailey TL; Perkins AC; Tallack MR; Xu Z; Liu H
BMC Bioinformatics; 2012 Dec; 13():331. PubMed ID: 23237380
[TBL] [Abstract][Full Text] [Related]
6. Detection and Analysis of Long Noncoding RNAs.
Lai F; Blumenthal E; Shiekhattar R
Methods Enzymol; 2016; 573():421-44. PubMed ID: 27372765
[TBL] [Abstract][Full Text] [Related]
7. Genome-wide identification of novel long non-coding RNAs in Populus tomentosa tension wood, opposite wood and normal wood xylem by RNA-seq.
Chen J; Quan M; Zhang D
Planta; 2015 Jan; 241(1):125-43. PubMed ID: 25230698
[TBL] [Abstract][Full Text] [Related]
8. ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data.
Yang JH; Li JH; Jiang S; Zhou H; Qu LH
Nucleic Acids Res; 2013 Jan; 41(Database issue):D177-87. PubMed ID: 23161675
[TBL] [Abstract][Full Text] [Related]
9. Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species.
Kern C; Wang Y; Chitwood J; Korf I; Delany M; Cheng H; Medrano JF; Van Eenennaam AL; Ernst C; Ross P; Zhou H
BMC Genomics; 2018 Sep; 19(1):684. PubMed ID: 30227846
[TBL] [Abstract][Full Text] [Related]
10. Chromatin and RNA Maps Reveal Regulatory Long Noncoding RNAs in Mouse.
Bogu GK; Vizán P; Stanton LW; Beato M; Di Croce L; Marti-Renom MA
Mol Cell Biol; 2015 Dec; 36(5):809-19. PubMed ID: 26711262
[TBL] [Abstract][Full Text] [Related]
11. Testing of library preparation methods for transcriptome sequencing of real life glioblastoma and brain tissue specimens: A comparative study with special focus on long non-coding RNAs.
Vecera M; Sana J; Oppelt J; Tichy B; Alena K; Lipina R; Smrcka M; Jancalek R; Hermanova M; Kren L; Slaby O
PLoS One; 2019; 14(2):e0211978. PubMed ID: 30742682
[TBL] [Abstract][Full Text] [Related]
12. Cross-species inference of long non-coding RNAs greatly expands the ruminant transcriptome.
Bush SJ; Muriuki C; McCulloch MEB; Farquhar IL; Clark EL; Hume DA
Genet Sel Evol; 2018 Apr; 50(1):20. PubMed ID: 29690875
[TBL] [Abstract][Full Text] [Related]
13. Long noncoding RNAs as metazoan developmental regulators.
Horabin JI
Chromosome Res; 2013 Dec; 21(6-7):673-84. PubMed ID: 24150236
[TBL] [Abstract][Full Text] [Related]
14. Methods to Study Long Noncoding RNA Expression and Dynamics in Zebrafish Using RNA Sequencing.
Mathew S; Sivadas A; Sehgal P; Kaushik K; Vellarikkal SK; Scaria V; Sivasubbu S
Methods Mol Biol; 2019; 1912():77-110. PubMed ID: 30635891
[TBL] [Abstract][Full Text] [Related]
15. Long noncoding RNAs shape transcription in plants.
Lucero L; Fonouni-Farde C; Crespi M; Ariel F
Transcription; 2020; 11(3-4):160-171. PubMed ID: 32406332
[TBL] [Abstract][Full Text] [Related]
16. Transcriptome-wide high-throughput mapping of protein-RNA occupancy profiles using POP-seq.
Srivastava M; Srivastava R; Janga SC
Sci Rep; 2021 Jan; 11(1):1175. PubMed ID: 33441968
[TBL] [Abstract][Full Text] [Related]
17. Analysis of Annotated and Unannotated Long Noncoding RNAs from Exosome Subtypes Using Next-Generation RNA Sequencing.
Suwakulsiri W; Chen M; Greening DW; Xu R; Simpson RJ
Methods Mol Biol; 2021; 2254():195-218. PubMed ID: 33326077
[TBL] [Abstract][Full Text] [Related]
18. Predicting the functions of long noncoding RNAs using RNA-seq based on Bayesian network.
Xiao Y; Lv Y; Zhao H; Gong Y; Hu J; Li F; Xu J; Bai J; Yu F; Li X
Biomed Res Int; 2015; 2015():839590. PubMed ID: 25815337
[TBL] [Abstract][Full Text] [Related]
19. lncRNADetector: a bioinformatics pipeline for long non-coding RNA identification and MAPslnc: a repository of medicinal and aromatic plant lncRNAs.
Shukla B; Gupta S; Srivastava G; Sharma A; Shukla AK; Shasany AK
RNA Biol; 2021 Dec; 18(12):2290-2295. PubMed ID: 33685383
[TBL] [Abstract][Full Text] [Related]
20. LncRNAs: emerging players in gene regulation and disease pathogenesis.
Kazemzadeh M; Safaralizadeh R; Orang AV
J Genet; 2015 Dec; 94(4):771-84. PubMed ID: 26690535
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
