178 related articles for article (PubMed ID: 23568031)
1. Evaluating the repair of DNA derived from formalin-fixed paraffin-embedded tissues prior to genomic profiling by SNP-CGH analysis.
Hosein AN; Song S; McCart Reed AE; Jayanthan J; Reid LE; Kutasovic JR; Cummings MC; Waddell N; Lakhani SR; Chenevix-Trench G; Simpson PT
Lab Invest; 2013 Jun; 93(6):701-10. PubMed ID: 23568031
[TBL] [Abstract][Full Text] [Related]
2. The utility and limitation of single nucleotide polymorphism analysis on whole genome amplified mesenchymal tumour DNA in formalin fixed tumour samples.
Liang CW; Lee YS; Marino-Enriquez A; Tsui K; Huang SH
Pathology; 2012 Jan; 44(1):33-41. PubMed ID: 22157688
[TBL] [Abstract][Full Text] [Related]
3. Whole genome SNP arrays using DNA derived from formalin-fixed, paraffin-embedded ovarian tumor tissue.
Thompson ER; Herbert SC; Forrest SM; Campbell IG
Hum Mutat; 2005 Oct; 26(4):384-9. PubMed ID: 16116623
[TBL] [Abstract][Full Text] [Related]
4. Genomic microarray analysis on formalin-fixed paraffin-embedded material for uveal melanoma prognostication.
Minca EC; Tubbs RR; Portier BP; Wang Z; Lanigan C; Aronow ME; Triozzi PL; Singh A; Cook JR; Saunthararajah Y; Plesec TP; Schoenfield L; Cawich V; Sulpizio S; Schultz RA
Cancer Genet; 2014; 207(7-8):306-15. PubMed ID: 25442074
[TBL] [Abstract][Full Text] [Related]
5. Optimization of the Affymetrix GeneChip Mapping 10K 2.0 Assay for routine clinical use on formalin-fixed paraffin-embedded tissues.
Lyons-Weiler M; Hagenkord J; Sciulli C; Dhir R; Monzon FA
Diagn Mol Pathol; 2008 Mar; 17(1):3-13. PubMed ID: 18303412
[TBL] [Abstract][Full Text] [Related]
6. High quality genomic copy number data from archival formalin-fixed paraffin-embedded leiomyosarcoma: optimisation of universal linkage system labelling.
Salawu A; Ul-Hassan A; Hammond D; Fernando M; Reed M; Sisley K
PLoS One; 2012; 7(11):e50415. PubMed ID: 23209738
[TBL] [Abstract][Full Text] [Related]
7. High-resolution copy number profiling by array CGH using DNA isolated from formalin-fixed, paraffin-embedded tissues.
van Essen HF; Ylstra B
Methods Mol Biol; 2012; 838():329-41. PubMed ID: 22228020
[TBL] [Abstract][Full Text] [Related]
8. Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples.
Nasri S; Anjomshoaa A; Song S; Guilford P; McNoe L; Black M; Phillips V; Reeve A; Humar B
Cancer Genet Cytogenet; 2010 Apr; 198(1):1-6. PubMed ID: 20303007
[TBL] [Abstract][Full Text] [Related]
9. CGH arrays compared for DNA isolated from formalin-fixed, paraffin-embedded material.
Krijgsman O; Israeli D; Haan JC; van Essen HF; Smeets SJ; Eijk PP; Steenbergen RD; Kok K; Tejpar S; Meijer GA; Ylstra B
Genes Chromosomes Cancer; 2012 Apr; 51(4):344-52. PubMed ID: 22162309
[TBL] [Abstract][Full Text] [Related]
10. Genome-wide comparison of paired fresh frozen and formalin-fixed paraffin-embedded gliomas by custom BAC and oligonucleotide array comparative genomic hybridization: facilitating analysis of archival gliomas.
Mohapatra G; Engler DA; Starbuck KD; Kim JC; Bernay DC; Scangas GA; Rousseau A; Batchelor TT; Betensky RA; Louis DN
Acta Neuropathol; 2011 Apr; 121(4):529-43. PubMed ID: 21080181
[TBL] [Abstract][Full Text] [Related]
11. Shallow whole genome sequencing for robust copy number profiling of formalin-fixed paraffin-embedded breast cancers.
Chin SF; Santonja A; Grzelak M; Ahn S; Sammut SJ; Clifford H; Rueda OM; Pugh M; Goldgraben MA; Bardwell HA; Cho EY; Provenzano E; Rojo F; Alba E; Caldas C
Exp Mol Pathol; 2018 Jun; 104(3):161-169. PubMed ID: 29608913
[TBL] [Abstract][Full Text] [Related]
12. Copy number and loss of heterozygosity detected by SNP array of formalin-fixed tissues using whole-genome amplification.
Stokes A; Drozdov I; Guerra E; Ouzounis CA; Warnakulasuriya S; Gleeson MJ; McGurk M; Tavassoli M; Odell EW
PLoS One; 2011; 6(9):e24503. PubMed ID: 21966361
[TBL] [Abstract][Full Text] [Related]
13. Formalin-fixed paraffin-embedded clinical tissues show spurious copy number changes in array-CGH profiles.
Mc Sherry EA; Mc Goldrick A; Kay EW; Hopkins AM; Gallagher WM; Dervan PA
Clin Genet; 2007 Nov; 72(5):441-7. PubMed ID: 17935507
[TBL] [Abstract][Full Text] [Related]
14. Random DNA fragmentation allows detection of single-copy, single-exon alterations of copy number by oligonucleotide array CGH in clinical FFPE samples.
Hostetter G; Kim SY; Savage S; Gooden GC; Barrett M; Zhang J; Alla L; Watanabe A; Einspahr J; Prasad A; Nickoloff BJ; Carpten J; Trent J; Alberts D; Bittner M
Nucleic Acids Res; 2010 Jan; 38(2):e9. PubMed ID: 19875416
[TBL] [Abstract][Full Text] [Related]
15. Genome-wide, high-resolution detection of copy number, loss of heterozygosity, and genotypes from formalin-fixed, paraffin-embedded tumor tissue using microarrays.
Jacobs S; Thompson ER; Nannya Y; Yamamoto G; Pillai R; Ogawa S; Bailey DK; Campbell IG
Cancer Res; 2007 Mar; 67(6):2544-51. PubMed ID: 17363572
[TBL] [Abstract][Full Text] [Related]
16. Large fragment Bst DNA polymerase for whole genome amplification of DNA from formalin-fixed paraffin-embedded tissues.
Aviel-Ronen S; Qi Zhu C; Coe BP; Liu N; Watson SK; Lam WL; Tsao MS
BMC Genomics; 2006 Dec; 7():312. PubMed ID: 17156491
[TBL] [Abstract][Full Text] [Related]
17. Formalin Fixation, Delay to Fixation, and Time in Fixative Adversely Impact Copy Number Variation Analysis by aCGH.
Li J; Greytak SR; Guan P; Engel KB; Goerlitz DS; Islam M; Varghese RS; Moore HM; Ressom HW
Biopreserv Biobank; 2023 Aug; 21(4):407-416. PubMed ID: 36169416
[TBL] [Abstract][Full Text] [Related]
18. Automated extraction of DNA and RNA from a single formalin-fixed paraffin-embedded tissue section for analysis of both single-nucleotide polymorphisms and mRNA expression.
Hennig G; Gehrmann M; Stropp U; Brauch H; Fritz P; Eichelbaum M; Schwab M; Schroth W
Clin Chem; 2010 Dec; 56(12):1845-53. PubMed ID: 20947696
[TBL] [Abstract][Full Text] [Related]
19. Performance comparison of three DNA extraction kits on human whole-exome data from formalin-fixed paraffin-embedded normal and tumor samples.
Bonnet E; Moutet ML; Baulard C; Bacq-Daian D; Sandron F; Mesrob L; Fin B; Delépine M; Palomares MA; Jubin C; Blanché H; Meyer V; Boland A; Olaso R; Deleuze JF
PLoS One; 2018; 13(4):e0195471. PubMed ID: 29621323
[TBL] [Abstract][Full Text] [Related]
20. Reference Size Matching, Whole-Genome Amplification, and Fluorescent Labeling as a Method for Chromosomal Microarray Analysis of Clinically Actionable Copy Number Alterations in Formalin-Fixed, Paraffin-Embedded Tumor Tissue.
Gunn SR; Govender S; Sims CL; Khurana A; Koo S; Scoggin J; Moore MW; Cotter PD
J Mol Diagn; 2018 May; 20(3):279-288. PubMed ID: 29471114
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
