These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

99 related articles for article (PubMed ID: 23581492)

  • 1. The stabilization effect of dielectric constant and acidic amino acids on arginine-arginine (Arg-Arg) pairings: database survey and computational studies.
    Zhang Z; Xu Z; Yang Z; Liu Y; Wang J; Shao Q; Li S; Lu Y; Zhu W
    J Phys Chem B; 2013 May; 117(17):4827-35. PubMed ID: 23581492
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Are acidic and basic groups in buried proteins predicted to be ionized?
    Kim J; Mao J; Gunner MR
    J Mol Biol; 2005 May; 348(5):1283-98. PubMed ID: 15854661
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Effect of charged amino acid side chain length on lateral cross-strand interactions between carboxylate- and guanidinium-containing residues in a β-hairpin.
    Kuo HT; Liu SL; Chiu WC; Fang CJ; Chang HC; Wang WR; Yang PA; Li JH; Huang SJ; Huang SL; Cheng RP
    Amino Acids; 2015 May; 47(5):885-98. PubMed ID: 25646959
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Like-Charge Guanidinium Pairing between Ligand and Receptor: An Unusual Interaction for Drug Discovery and Design?
    Yang Y; Xu Z; Zhang Z; Yang Z; Liu Y; Wang J; Cai T; Li S; Chen K; Shi J; Zhu W
    J Phys Chem B; 2015 Sep; 119(36):11988-97. PubMed ID: 26287988
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Effect of charged amino acid side chain length on lateral cross-strand interactions between carboxylate-containing residues and lysine analogues in a β-hairpin.
    Kuo HT; Fang CJ; Tsai HY; Yang MF; Chang HC; Liu SL; Kuo LH; Wang WR; Yang PA; Huang SJ; Huang SL; Cheng RP
    Biochemistry; 2013 Dec; 52(51):9212-22. PubMed ID: 24328126
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A survey of aspartate-phenylalanine and glutamate-phenylalanine interactions in the protein data bank: searching for anion-π pairs.
    Philip V; Harris J; Adams R; Nguyen D; Spiers J; Baudry J; Howell EE; Hinde RJ
    Biochemistry; 2011 Apr; 50(14):2939-50. PubMed ID: 21366334
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Effect of side chain length on intrahelical interactions between carboxylate- and guanidinium-containing amino acids.
    Kuo HT; Yang PA; Wang WR; Hsu HC; Wu CH; Ting YT; Weng MH; Kuo LH; Cheng RP
    Amino Acids; 2014 Aug; 46(8):1867-83. PubMed ID: 24744084
    [TBL] [Abstract][Full Text] [Related]  

  • 8. What stabilizes close arginine pairing in proteins?
    Lee D; Lee J; Seok C
    Phys Chem Chem Phys; 2013 Apr; 15(16):5844-53. PubMed ID: 23486862
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Like-charge attraction of molecular cations in water: subtle balance between interionic interactions and ionic solvation effect.
    Inagaki T; Aono S; Nakano H; Yamamoto T
    J Phys Chem B; 2014 May; 118(20):5499-508. PubMed ID: 24787756
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Chemical fragments that hydrogen bond to Asp, Glu, Arg, and His side chains in protein binding sites.
    Chan AW; Laskowski RA; Selwood DL
    J Med Chem; 2010 Apr; 53(8):3086-94. PubMed ID: 20230000
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Effect of glutamate side chain length on intrahelical glutamate-lysine ion pairing interactions.
    Cheng RP; Wang WR; Girinath P; Yang PA; Ahmad R; Li JH; Hart P; Kokona B; Fairman R; Kilpatrick C; Argiros A
    Biochemistry; 2012 Sep; 51(36):7157-72. PubMed ID: 22931137
    [TBL] [Abstract][Full Text] [Related]  

  • 12. First-second shell interactions in metal binding sites in proteins: a PDB survey and DFT/CDM calculations.
    Dudev T; Lin YL; Dudev M; Lim C
    J Am Chem Soc; 2003 Mar; 125(10):3168-80. PubMed ID: 12617685
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Electrostatic interactions involving lysine make major contributions to collagen triple-helix stability.
    Persikov AV; Ramshaw JA; Kirkpatrick A; Brodsky B
    Biochemistry; 2005 Feb; 44(5):1414-22. PubMed ID: 15683226
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Gas-phase salt bridge interactions between glutamic acid and arginine.
    Jaeqx S; Oomens J; Rijs AM
    Phys Chem Chem Phys; 2013 Oct; 15(38):16341-52. PubMed ID: 23999680
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Predicting DNA-binding amino acid residues from electrostatic stabilization upon mutation to Asp/Glu and evolutionary conservation.
    Chen YC; Wu CY; Lim C
    Proteins; 2007 May; 67(3):671-80. PubMed ID: 17340633
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Free-energy calculations of protein-ligand cation-pi and amino-pi interactions: from vacuum to proteinlike environments.
    Biot C; Buisine E; Rooman M
    J Am Chem Soc; 2003 Nov; 125(46):13988-94. PubMed ID: 14611235
    [TBL] [Abstract][Full Text] [Related]  

  • 17. STAAR: statistical analysis of aromatic rings.
    Jenkins DD; Harris JB; Howell EE; Hinde RJ; Baudry J
    J Comput Chem; 2013 Mar; 34(6):518-22. PubMed ID: 23115119
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Surface salt bridges, double-mutant cycles, and protein stability: an experimental and computational analysis of the interaction of the Asp 23 side chain with the N-terminus of the N-terminal domain of the ribosomal protein l9.
    Luisi DL; Snow CD; Lin JJ; Hendsch ZS; Tidor B; Raleigh DP
    Biochemistry; 2003 Jun; 42(23):7050-60. PubMed ID: 12795600
    [TBL] [Abstract][Full Text] [Related]  

  • 19. How the extra methylene group affects the ligation properties of Glu vs. Asp and Gln vs. Asn amino acids: a DFT/PCM study.
    Dudev T; Doudeva L
    J Mol Model; 2017 Feb; 23(2):45. PubMed ID: 28154982
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Inverse electrostatic effect: electrostatic repulsion in the unfolded state stabilizes a leucine zipper.
    Marti DN; Bosshard HR
    Biochemistry; 2004 Oct; 43(39):12436-47. PubMed ID: 15449933
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.