These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

284 related articles for article (PubMed ID: 23592973)

  • 1. Shining a light on dark sequencing: characterising errors in Ion Torrent PGM data.
    Bragg LM; Stone G; Butler MK; Hugenholtz P; Tyson GW
    PLoS Comput Biol; 2013 Apr; 9(4):e1003031. PubMed ID: 23592973
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparison of error correction algorithms for Ion Torrent PGM data: application to hepatitis B virus.
    Song L; Huang W; Kang J; Huang Y; Ren H; Ding K
    Sci Rep; 2017 Aug; 7(1):8106. PubMed ID: 28808243
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ARAMIS: From systematic errors of NGS long reads to accurate assemblies.
    Sacristán-Horcajada E; González-de la Fuente S; Peiró-Pastor R; Carrasco-Ramiro F; Amils R; Requena JM; Berenguer J; Aguado B
    Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34013348
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Pollux: platform independent error correction of single and mixed genomes.
    Marinier E; Brown DG; McConkey BJ
    BMC Bioinformatics; 2015 Jan; 16(1):10. PubMed ID: 25592313
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation and optimisation of indel detection workflows for ion torrent sequencing of the BRCA1 and BRCA2 genes.
    Yeo ZX; Wong JC; Rozen SG; Lee AS
    BMC Genomics; 2014 Jun; 15(1):516. PubMed ID: 24962530
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Amplicon Indel Hunter Is a Novel Bioinformatics Tool to Detect Large Somatic Insertion/Deletion Mutations in Amplicon-Based Next-Generation Sequencing Data.
    Kadri S; Zhen CJ; Wurst MN; Long BC; Jiang ZF; Wang YL; Furtado LV; Segal JP
    J Mol Diagn; 2015 Nov; 17(6):635-43. PubMed ID: 26319364
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Evaluation of the Ion Torrent Personal Genome Machine for Gene-Targeted Studies Using Amplicons of the Nitrogenase Gene nifH.
    Zhang B; Penton CR; Xue C; Wang Q; Zheng T; Tiedje JM
    Appl Environ Microbiol; 2015 Jul; 81(13):4536-45. PubMed ID: 25911484
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data.
    Caboche S; Audebert C; Lemoine Y; Hot D
    BMC Genomics; 2014 Apr; 15():264. PubMed ID: 24708189
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Improving indel detection specificity of the Ion Torrent PGM benchtop sequencer.
    Yeo ZX; Chan M; Yap YS; Ang P; Rozen S; Lee AS
    PLoS One; 2012; 7(9):e45798. PubMed ID: 23029247
    [TBL] [Abstract][Full Text] [Related]  

  • 10. QuorUM: An Error Corrector for Illumina Reads.
    Marçais G; Yorke JA; Zimin A
    PLoS One; 2015; 10(6):e0130821. PubMed ID: 26083032
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Performance comparison of benchtop high-throughput sequencing platforms.
    Loman NJ; Misra RV; Dallman TJ; Constantinidou C; Gharbia SE; Wain J; Pallen MJ
    Nat Biotechnol; 2012 May; 30(5):434-9. PubMed ID: 22522955
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Blue: correcting sequencing errors using consensus and context.
    Greenfield P; Duesing K; Papanicolaou A; Bauer DC
    Bioinformatics; 2014 Oct; 30(19):2723-32. PubMed ID: 24919879
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Detection of variations and identifying genomic breakpoints for large deletions in the LDLR by Ion Torrent semiconductor sequencing.
    Faiz F; Allcock RJ; Hooper AJ; van Bockxmeer FM
    Atherosclerosis; 2013 Oct; 230(2):249-55. PubMed ID: 24075752
    [TBL] [Abstract][Full Text] [Related]  

  • 14. High-throughput sequencing of murine immunoglobulin heavy chain repertoires using single side unique molecular identifiers on an Ion Torrent PGM.
    Bürckert JP; Faison WJ; Mustin DE; Dubois ARSX; Sinner R; Hunewald O; Wienecke-Baldacchino A; Brieger A; Muller CP
    Oncotarget; 2018 Jul; 9(54):30225-30239. PubMed ID: 30100985
    [TBL] [Abstract][Full Text] [Related]  

  • 15. INDELseek: detection of complex insertions and deletions from next-generation sequencing data.
    Au CH; Leung AY; Kwong A; Chan TL; Ma ES
    BMC Genomics; 2017 Jan; 18(1):16. PubMed ID: 28056804
    [TBL] [Abstract][Full Text] [Related]  

  • 16. [Detection of pathogenic mutations in Marfan syndrome by targeted next-generation semiconductor sequencing].
    Lu C; Wu W; Xiao J; Meng Y; Zhang S; Zhang X
    Zhonghua Yi Xue Yi Chuan Xue Za Zhi; 2013 Jun; 30(3):301-4. PubMed ID: 23744319
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Dindel: accurate indel calls from short-read data.
    Albers CA; Lunter G; MacArthur DG; McVean G; Ouwehand WH; Durbin R
    Genome Res; 2011 Jun; 21(6):961-73. PubMed ID: 20980555
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Performance characteristics of the AmpliSeq Cancer Hotspot panel v2 in combination with the Ion Torrent Next Generation Sequencing Personal Genome Machine.
    Butler KS; Young MY; Li Z; Elespuru RK; Wood SC
    Regul Toxicol Pharmacol; 2016 Feb; 74():178-86. PubMed ID: 26387931
    [TBL] [Abstract][Full Text] [Related]  

  • 19. SVSR: A Program to Simulate Structural Variations and Generate Sequencing Reads for Multiple Platforms.
    Yuan X; Gao M; Bai J; Duan J
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(3):1082-1091. PubMed ID: 30334804
    [TBL] [Abstract][Full Text] [Related]  

  • 20. mInDel: a high-throughput and efficient pipeline for genome-wide InDel marker development.
    Lv Y; Liu Y; Zhao H
    BMC Genomics; 2016 Apr; 17():290. PubMed ID: 27079510
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.