190 related articles for article (PubMed ID: 23609536)
1. An aromatic residue switch in enhancer-dependent bacterial RNA polymerase controls transcription intermediate complex activity.
Wiesler SC; Weinzierl RO; Buck M
Nucleic Acids Res; 2013 Jun; 41(11):5874-86. PubMed ID: 23609536
[TBL] [Abstract][Full Text] [Related]
2. A dual switch controls bacterial enhancer-dependent transcription.
Wiesler SC; Burrows PC; Buck M
Nucleic Acids Res; 2012 Nov; 40(21):10878-92. PubMed ID: 22965125
[TBL] [Abstract][Full Text] [Related]
3. Real-Time Single-Molecule Studies of RNA Polymerase-Promoter Open Complex Formation Reveal Substantial Heterogeneity Along the Promoter-Opening Pathway.
Malinen AM; Bakermans J; Aalto-Setälä E; Blessing M; Bauer DLV; Parilova O; Belogurov GA; Dulin D; Kapanidis AN
J Mol Biol; 2022 Jan; 434(2):167383. PubMed ID: 34863780
[TBL] [Abstract][Full Text] [Related]
4. Mechanisms for activating bacterial RNA polymerase.
Ghosh T; Bose D; Zhang X
FEMS Microbiol Rev; 2010 Sep; 34(5):611-27. PubMed ID: 20629756
[TBL] [Abstract][Full Text] [Related]
5. Base flipping in open complex formation at bacterial promoters.
Karpen ME; deHaseth PL
Biomolecules; 2015 Apr; 5(2):668-78. PubMed ID: 25927327
[TBL] [Abstract][Full Text] [Related]
6. Stepwise Promoter Melting by Bacterial RNA Polymerase.
Chen J; Chiu C; Gopalkrishnan S; Chen AY; Olinares PDB; Saecker RM; Winkelman JT; Maloney MF; Chait BT; Ross W; Gourse RL; Campbell EA; Darst SA
Mol Cell; 2020 Apr; 78(2):275-288.e6. PubMed ID: 32160514
[TBL] [Abstract][Full Text] [Related]
7. Cryo-EM structure of
Narayanan A; Vago FS; Li K; Qayyum MZ; Yernool D; Jiang W; Murakami KS
J Biol Chem; 2018 May; 293(19):7367-7375. PubMed ID: 29581236
[TBL] [Abstract][Full Text] [Related]
8. Quantitative parameters of bacterial RNA polymerase open-complex formation, stabilization and disruption on a consensus promoter.
Bera SC; America PPB; Maatsola S; Seifert M; Ostrofet E; Cnossen J; Spermann M; Papini FS; Depken M; Malinen AM; Dulin D
Nucleic Acids Res; 2022 Jul; 50(13):7511-7528. PubMed ID: 35819191
[TBL] [Abstract][Full Text] [Related]
9. Structure of a bacterial RNA polymerase holoenzyme open promoter complex.
Bae B; Feklistov A; Lass-Napiorkowska A; Landick R; Darst SA
Elife; 2015 Sep; 4():. PubMed ID: 26349032
[TBL] [Abstract][Full Text] [Related]
10. Aromatic amino acids in region 2.3 of Escherichia coli sigma 70 participate collectively in the formation of an RNA polymerase-promoter open complex.
Panaghie G; Aiyar SE; Bobb KL; Hayward RS; de Haseth PL
J Mol Biol; 2000 Jun; 299(5):1217-30. PubMed ID: 10873447
[TBL] [Abstract][Full Text] [Related]
11. Interactions between RNA polymerase and the core recognition element are a determinant of transcription start site selection.
Vvedenskaya IO; Vahedian-Movahed H; Zhang Y; Taylor DM; Ebright RH; Nickels BE
Proc Natl Acad Sci U S A; 2016 May; 113(21):E2899-905. PubMed ID: 27162333
[TBL] [Abstract][Full Text] [Related]
12. The mechanism of variability in transcription start site selection.
Yu L; Winkelman JT; Pukhrambam C; Strick TR; Nickels BE; Ebright RH
Elife; 2017 Nov; 6():. PubMed ID: 29168694
[TBL] [Abstract][Full Text] [Related]
13. Cooperativity and interaction energy threshold effects in recognition of the -10 promoter element by bacterial RNA polymerase.
Mekler V; Severinov K
Nucleic Acids Res; 2013 Aug; 41(15):7276-85. PubMed ID: 23771146
[TBL] [Abstract][Full Text] [Related]
14. Protein-DNA interactions that govern AAA+ activator-dependent bacterial transcription initiation.
Burrows PC; Wigneshweraraj SR; Buck M
J Mol Biol; 2008 Jan; 375(1):43-58. PubMed ID: 18005983
[TBL] [Abstract][Full Text] [Related]
15. Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching.
Revyakin A; Liu C; Ebright RH; Strick TR
Science; 2006 Nov; 314(5802):1139-43. PubMed ID: 17110577
[TBL] [Abstract][Full Text] [Related]
16. The sigma 54 DNA-binding domain includes a determinant of enhancer responsiveness.
Chaney M; Buck M
Mol Microbiol; 1999 Sep; 33(6):1200-9. PubMed ID: 10510234
[TBL] [Abstract][Full Text] [Related]
17. Coupling of downstream RNA polymerase-promoter interactions with formation of catalytically competent transcription initiation complex.
Mekler V; Minakhin L; Borukhov S; Mustaev A; Severinov K
J Mol Biol; 2014 Dec; 426(24):3973-3984. PubMed ID: 25311862
[TBL] [Abstract][Full Text] [Related]
18. Effect of heparin and heparan sulphate on open promoter complex formation for a simple tandem gene model using ex situ atomic force microscopy.
Chammas O; Bonass WA; Thomson NH
Methods; 2017 May; 120():91-102. PubMed ID: 28434996
[TBL] [Abstract][Full Text] [Related]
19. Bacillus subtilis δ Factor Functions as a Transcriptional Regulator by Facilitating the Open Complex Formation.
Prajapati RK; Sengupta S; Rudra P; Mukhopadhyay J
J Biol Chem; 2016 Jan; 291(3):1064-75. PubMed ID: 26546673
[TBL] [Abstract][Full Text] [Related]
20. Sequences in sigma(54) region I required for binding to early melted DNA and their involvement in sigma-DNA isomerisation.
Gallegos MT; Buck M
J Mol Biol; 2000 Apr; 297(4):849-59. PubMed ID: 10736222
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]