These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

154 related articles for article (PubMed ID: 23616008)

  • 1. A guide to CORNET for the construction of coexpression and protein-protein interaction networks.
    De Bodt S; Inzé D
    Methods Mol Biol; 2013; 1011():327-43. PubMed ID: 23616008
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CORNET 2.0: integrating plant coexpression, protein-protein interactions, regulatory interactions, gene associations and functional annotations.
    De Bodt S; Hollunder J; Nelissen H; Meulemeester N; Inzé D
    New Phytol; 2012 Aug; 195(3):707-720. PubMed ID: 22651224
    [TBL] [Abstract][Full Text] [Related]  

  • 3. CORNET: a user-friendly tool for data mining and integration.
    De Bodt S; Carvajal D; Hollunder J; Van den Cruyce J; Movahedi S; Inzé D
    Plant Physiol; 2010 Mar; 152(3):1167-79. PubMed ID: 20053712
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Exploring Plant Co-Expression and Gene-Gene Interactions with CORNET 3.0.
    Van Bel M; Coppens F
    Methods Mol Biol; 2017; 1533():201-212. PubMed ID: 27987172
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Transcriptome coexpression analysis using ATTED-II for integrated transcriptomic/metabolomic analysis.
    Yonekura-Sakakibara K; Saito K
    Methods Mol Biol; 2013; 1011():317-26. PubMed ID: 23616007
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Bioinformatic tools in Arabidopsis research.
    de Lucas M; Provart NJ; Brady SM
    Methods Mol Biol; 2014; 1062():97-136. PubMed ID: 24057362
    [TBL] [Abstract][Full Text] [Related]  

  • 7. MILANO--custom annotation of microarray results using automatic literature searches.
    Rubinstein R; Simon I
    BMC Bioinformatics; 2005 Jan; 6():12. PubMed ID: 15661078
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Arabidopsis database and stock resources.
    Li D; Dreher K; Knee E; Brkljacic J; Grotewold E; Berardini TZ; Lamesch P; Garcia-Hernandez M; Reiser L; Huala E
    Methods Mol Biol; 2014; 1062():65-96. PubMed ID: 24057361
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ThaleMine: A Warehouse for Arabidopsis Data Integration and Discovery.
    Krishnakumar V; Contrino S; Cheng CY; Belyaeva I; Ferlanti ES; Miller JR; Vaughn MW; Micklem G; Town CD; Chan AP
    Plant Cell Physiol; 2017 Jan; 58(1):e4. PubMed ID: 28013278
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Visualization and analysis of biological networks.
    Millán PP
    Methods Mol Biol; 2013; 1021():63-88. PubMed ID: 23715980
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Integrative data-mining tools to link gene and function.
    El Yacoubi B; de Crécy-Lagard V
    Methods Mol Biol; 2014; 1101():43-66. PubMed ID: 24233777
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Unraveling transcriptional control in Arabidopsis using cis-regulatory elements and coexpression networks.
    Vandepoele K; Quimbaya M; Casneuf T; De Veylder L; Van de Peer Y
    Plant Physiol; 2009 Jun; 150(2):535-46. PubMed ID: 19357200
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Rapid and selective surveillance of Arabidopsis thaliana genome annotations with Centrifuge.
    Armand F; Bucher P; Jongeneel CV; Farmer EE
    Bioinformatics; 2005 Jun; 21(12):2906-8. PubMed ID: 15817689
    [TBL] [Abstract][Full Text] [Related]  

  • 14. M@IA: a modular open-source application for microarray workflow and integrative datamining.
    Le Béchec A; Zindy P; Sierocinski T; Petritis D; Bihouée A; Le Meur N; Léger J; Théret N
    In Silico Biol; 2008; 8(1):63-9. PubMed ID: 18430991
    [TBL] [Abstract][Full Text] [Related]  

  • 15. AtCAST, a tool for exploring gene expression similarities among DNA microarray experiments using networks.
    Sasaki E; Takahashi C; Asami T; Shimada Y
    Plant Cell Physiol; 2011 Jan; 52(1):169-80. PubMed ID: 21113043
    [TBL] [Abstract][Full Text] [Related]  

  • 16. GeneTools--application for functional annotation and statistical hypothesis testing.
    Beisvag V; Jünge FK; Bergum H; Jølsum L; Lydersen S; Günther CC; Ramampiaro H; Langaas M; Sandvik AK; Laegreid A
    BMC Bioinformatics; 2006 Oct; 7():470. PubMed ID: 17062145
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Plant-based microarray data at the European Bioinformatics Institute. Introducing AtMIAMExpress, a submission tool for Arabidopsis gene expression data to ArrayExpress.
    Mukherjee G; Abeygunawardena N; Parkinson H; Contrino S; Durinck S; Farne A; Holloway E; Lilja P; Moreau Y; Oezcimen A; Rayner T; Sharma A; Brazma A; Sarkans U; Shojatalab M
    Plant Physiol; 2005 Oct; 139(2):632-6. PubMed ID: 16219923
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations.
    Hooper CM; Castleden IR; Tanz SK; Aryamanesh N; Millar AH
    Nucleic Acids Res; 2017 Jan; 45(D1):D1064-D1074. PubMed ID: 27899614
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Construction of coffee transcriptome networks based on gene annotation semantics.
    Castillo LF; Galeano N; Isaza GA; Gaitán A
    J Integr Bioinform; 2012 Jul; 9(3):205. PubMed ID: 22829576
    [TBL] [Abstract][Full Text] [Related]  

  • 20. EasyGO: Gene Ontology-based annotation and functional enrichment analysis tool for agronomical species.
    Zhou X; Su Z
    BMC Genomics; 2007 Jul; 8():246. PubMed ID: 17645808
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.