These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

197 related articles for article (PubMed ID: 23632165)

  • 1. QualitySNPng: a user-friendly SNP detection and visualization tool.
    Nijveen H; van Kaauwen M; Esselink DG; Hoegen B; Vosman B
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W587-90. PubMed ID: 23632165
    [TBL] [Abstract][Full Text] [Related]  

  • 2. QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyploid species.
    Tang J; Vosman B; Voorrips RE; van der Linden CG; Leunissen JA
    BMC Bioinformatics; 2006 Oct; 7():438. PubMed ID: 17029635
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SNP-VISTA: an interactive SNP visualization tool.
    Shah N; Teplitsky MV; Minovitsky S; Pennacchio LA; Hugenholtz P; Hamann B; Dubchak IL
    BMC Bioinformatics; 2005 Dec; 6():292. PubMed ID: 16336665
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SNP-PHAGE--High throughput SNP discovery pipeline.
    Matukumalli LK; Grefenstette JJ; Hyten DL; Choi IY; Cregan PB; Van Tassell CP
    BMC Bioinformatics; 2006 Oct; 7():468. PubMed ID: 17059604
    [TBL] [Abstract][Full Text] [Related]  

  • 5. HaploSNPer: a web-based allele and SNP detection tool.
    Tang J; Leunissen JA; Voorrips RE; van der Linden CG; Vosman B
    BMC Genet; 2008 Feb; 9():23. PubMed ID: 18307806
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects.
    Dereeper A; Nicolas S; Le Cunff L; Bacilieri R; Doligez A; Peros JP; Ruiz M; This P
    BMC Bioinformatics; 2011 May; 12():134. PubMed ID: 21545712
    [TBL] [Abstract][Full Text] [Related]  

  • 7. SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations.
    Dereeper A; Homa F; Andres G; Sempere G; Sarah G; Hueber Y; Dufayard JF; Ruiz M
    Nucleic Acids Res; 2015 Jul; 43(W1):W295-300. PubMed ID: 26040700
    [TBL] [Abstract][Full Text] [Related]  

  • 8. An integrated SNP mining and utilization (ISMU) pipeline for next generation sequencing data.
    Azam S; Rathore A; Shah TM; Telluri M; Amindala B; Ruperao P; Katta MA; Varshney RK
    PLoS One; 2014; 9(7):e101754. PubMed ID: 25003610
    [TBL] [Abstract][Full Text] [Related]  

  • 9. KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes.
    Steiner A; Stucki D; Coscolla M; Borrell S; Gagneux S
    BMC Genomics; 2014 Oct; 15(1):881. PubMed ID: 25297886
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Haplotag: Software for Haplotype-Based Genotyping-by-Sequencing Analysis.
    Tinker NA; Bekele WA; Hattori J
    G3 (Bethesda); 2016 Apr; 6(4):857-63. PubMed ID: 26818073
    [TBL] [Abstract][Full Text] [Related]  

  • 11. SWEEP: A Tool for Filtering High-Quality SNPs in Polyploid Crops.
    Clevenger JP; Ozias-Akins P
    G3 (Bethesda); 2015 Jul; 5(9):1797-803. PubMed ID: 26153076
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Flapjack--graphical genotype visualization.
    Milne I; Shaw P; Stephen G; Bayer M; Cardle L; Thomas WT; Flavell AJ; Marshall D
    Bioinformatics; 2010 Dec; 26(24):3133-4. PubMed ID: 20956241
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SNPsyn: detection and exploration of SNP-SNP interactions.
    Curk T; Rot G; Zupan B
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W444-9. PubMed ID: 21576219
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ASSIsT: an automatic SNP scoring tool for in- and outbreeding species.
    Di Guardo M; Micheletti D; Bianco L; Koehorst-van Putten HJ; Longhi S; Costa F; Aranzana MJ; Velasco R; Arús P; Troggio M; van de Weg EW
    Bioinformatics; 2015 Dec; 31(23):3873-4. PubMed ID: 26249809
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics.
    Lohse M; Bolger AM; Nagel A; Fernie AR; Lunn JE; Stitt M; Usadel B
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W622-7. PubMed ID: 22684630
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CGHPRO -- a comprehensive data analysis tool for array CGH.
    Chen W; Erdogan F; Ropers HH; Lenzner S; Ullmann R
    BMC Bioinformatics; 2005 Apr; 6():85. PubMed ID: 15807904
    [TBL] [Abstract][Full Text] [Related]  

  • 17. WASP: a Web-based Allele-Specific PCR assay designing tool for detecting SNPs and mutations.
    Wangkumhang P; Chaichoompu K; Ngamphiw C; Ruangrit U; Chanprasert J; Assawamakin A; Tongsima S
    BMC Genomics; 2007 Aug; 8():275. PubMed ID: 17697334
    [TBL] [Abstract][Full Text] [Related]  

  • 18. NGS_SNPAnalyzer: a desktop software supporting genome projects by identifying and visualizing sequence variations from next-generation sequencing data.
    Lee DJ; Kwon T; Kim CK; Seol YJ; Park DS; Lee TH; Ahn BO
    Genes Genomics; 2020 Nov; 42(11):1311-1317. PubMed ID: 32980993
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Fast-GBS: a new pipeline for the efficient and highly accurate calling of SNPs from genotyping-by-sequencing data.
    Torkamaneh D; Laroche J; Bastien M; Abed A; Belzile F
    BMC Bioinformatics; 2017 Jan; 18(1):5. PubMed ID: 28049422
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Seq-SNPing: multiple-alignment tool for SNP discovery, SNP ID identification, and RFLP genotyping.
    Chang HW; Chuang LY; Cheng YH; Ho CH; Wen CH; Yang CH
    OMICS; 2009 Jun; 13(3):253-60. PubMed ID: 19514837
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.